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SCNpilot_cont_300_bf_scaffold_143_curated_2

Organism: scnpilot_dereplicated_Sphingomonas_2

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: 2566..3888

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane efflux family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZX5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 429.0
  • Bit_score: 567
  • Evalue 1.10e-158
DNA, contig: SP607 {ECO:0000313|EMBL:GAN12385.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 429.0
  • Bit_score: 567
  • Evalue 1.60e-158
TolC family type I secretion outer membrane protein; K12543 outer membrane protein LapE similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 437.0
  • Bit_score: 329
  • Evalue 1.70e-87

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
TTGGGAGAAAGGTTGCGACGAGGCCCGCTCGGCGGTGCGATCGGCATCATGGCGATCGGAACGCTGGCAGCCTCCCTGGCCGGCACGGTGTACGCGCAGGAAAGTGCCGGGCTCTCGCTCGAGGCGGCGGTCCGCCAGGCCGTGGCGTGGCATCCGAACATCGTCTCCGCAGCGGCCACGCTGGATGCGCGCGGCGCGGATGTGGACGTCGCGCGGGCCGGCTACCTGCCCCAGATAAGTGCGGGCGTCGGCACCGGCTACGACAATCGCCTCGGCTCGAGCTGGCGGCCGCGCCCCCAAGTCTCCGCCTCGCAGATGCTCTATGATTTCGGCAAGGTCCGCAGCGCGGTGGACTATGCGCAGGCGGGCACGCGCGTCGGCCGCGCCGATCTGCTCCTCGCGATCGACGGGCTCATCCACGATACCGGCTATGCGATCGTGGAACTGCAGCGCAACGCGGCGCTCCACGACATCGCCGAGGAACAGCTGGCGCGGATCCGCGAGATCAGCGGGCTGGTCGCCGATCGGGTCGCCAAGGGTGCGTCCACGCGGTCGGACGGGCTTCAGGCGGAATCGCGGGTTGCCGCCGCCAAGGCGACGCTGGCGCAGATCGATGCCGAGCAACGACGCTGGGGCAGCAATCTCGCCTTTCTTCTCGGCGACGAAAAGGCCCGGGCGCCGGTGAGCGCCGACATGCCCGACTGGCTGATGCGCAGTTGCGCCGCCGGGCTGGCCGATTGGAGCACGGTGCCGGCAGTGATGCGCGCCGACGCCCAGCGCGAACAGGCCGCCGCGCAGCTTCACCGCAGCCGCGCCGATCGCCTGCCCACCGTATCGCTCGCCGGGGACGCGGCCGCGGACATCGGGTCGCCCTTCTCCGATCGCAGCGCCTACAGCTTCGGGCTCAGCGTCTCGAGCAACATATTCGGCGGCAACGCCACCCGCGCCCGCGTCCGCAGCGCGGATTATTCGCTCGCCGCCGCCGACGCCGCCTCGCGCCAGGCGCGCAACGAAGCGAGCCAGCGGCTCGCCGAGGCCCGGCAGCAGATCGGCAGCCTTACCCGGCTGCTCGACACGCTCAACCTGCGCGAGGCAGACATGGCGGAAACCGGACAACTCTACCGCGCGCAATATCTCGAAATGGGCACGCGGACGCTGGTCGACCTGCTCAATGCGGAACAGGAACTGCACCAGGCGCGGTTCGACGCAGTCAATACCGAGCATGACCTGCGCCGGCTGCAGCTCGACTGCCTCTATTACTCCGGCCGCTCGCGCGATGCCTTCGGCCTGACGGGCACGCGCCTGCGGGGCGTGACGCTGTGA
PROTEIN sequence
Length: 441
LGERLRRGPLGGAIGIMAIGTLAASLAGTVYAQESAGLSLEAAVRQAVAWHPNIVSAAATLDARGADVDVARAGYLPQISAGVGTGYDNRLGSSWRPRPQVSASQMLYDFGKVRSAVDYAQAGTRVGRADLLLAIDGLIHDTGYAIVELQRNAALHDIAEEQLARIREISGLVADRVAKGASTRSDGLQAESRVAAAKATLAQIDAEQRRWGSNLAFLLGDEKARAPVSADMPDWLMRSCAAGLADWSTVPAVMRADAQREQAAAQLHRSRADRLPTVSLAGDAAADIGSPFSDRSAYSFGLSVSSNIFGGNATRARVRSADYSLAAADAASRQARNEASQRLAEARQQIGSLTRLLDTLNLREADMAETGQLYRAQYLEMGTRTLVDLLNAEQELHQARFDAVNTEHDLRRLQLDCLYYSGRSRDAFGLTGTRLRGVTL*