name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_143_curated_1
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..2457
|
Glycoprotein n=4 Tax=Bacteria RepID=M3J5U3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:GAM00602.1}; Flags: Fragment;; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_2
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2566..3888
|
Outer membrane efflux family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZX5_9SPHN
DNA, contig: SP607 {ECO:0000313|EMBL:GAN12385.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
TolC family type I secretion outer membrane protein; K12543 outer membrane protein LapE
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_3
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3885..6008
|
Type I secretion system ATPase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZX4_9SPHN
DNA, contig: SP607 {ECO:0000313|EMBL:GAN12384.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
type I secretion system ATPase; K12541 ATP-binding cassette, subfamily C, bacterial LapB
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_4
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6005..7192
|
Type I secretion membrane fusion , HlyD family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZX3_9SPHN
Putative type I secretion system membrane fusion protein {ECO:0000313|EMBL:GAM00605.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
HlyD family type I secretion membrane fusion protein; K12542 membrane fusion protein LapC
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_5
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7327..7770
|
MarR family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZX2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAM00606.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
response regulator receiver protein
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_6
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7868..9163)
|
Nitrate ABC transporter ATP-binding protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4Q3K8_9CAUL
Nitrate ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESQ92440.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
nitrate/sulfonate/bicarbonate ABC transporter ATPase; K02049 NitT/TauT family transport system ATP-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_7
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9181..10935)
|
Sulfonate ABC transporter permease n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4PVM4_9CAUL
Sulfonate ABC transporter permease {ECO:0000313|EMBL:ESQ92441.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_8
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11203..11850)
|
Two-component system response regulator n=3 Tax=Xanthomonas RepID=G2LSP5_9XANT
two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:CAJ23781.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_9
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11847..12887)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
Two component sensor kinase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K163_AGRVS
two component sensor kinase
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_10
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13032..14615
|
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TXK6_TISMK
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:AFK57494.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_11
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14987..15367
|
DNA-binding protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CABCF
DNA-binding protein {ECO:0000313|EMBL:AJP71349.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein; K11940 heat shock protein HspQ
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_12
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15486..15863
|
50S ribosomal protein L21 n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA0EE
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15889..16158
|
50S ribosomal protein L27 n=1 Tax=Sphingomonas elodea RepID=UPI0002631086
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
rpmA; 50S ribosomal protein L27
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_14
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16333..16890
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000367E2FD
GNAT family acetyltransferase {ECO:0000313|EMBL:AJP74292.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
N-acetyltransferase GCN5
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_15
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16996..17604
|
TetR family transcriptional regulator n=1 Tax=Sphingomonas elodea RepID=UPI0002631083
TetR family transcriptional regulator {ECO:0000313|EMBL:AJP71345.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
TetR family transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_16
unknown
|
Not on your lists |
17601..17960
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_143_curated_17
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17974..19938)
|
kinase n=1 Tax=Sphingomonas elodea RepID=UPI0002631081
Kinase {ECO:0000313|EMBL:AJP74291.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
integral membrane sensor hybrid histidine kinase
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_18
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19984..21246)
|
bioF; 8-amino-7-oxononanoate synthase (EC:2.3.1.47); K00652 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
8-amino-7-oxononanoate synthase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CABC3
8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:AJP71344.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_19
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21252..21494)
|
phosphopantetheine-binding protein n=1 Tax=Sphingomonas elodea RepID=UPI000263107F
Phosphopantetheine-binding protein {ECO:0000313|EMBL:AJP71343.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
acyl carrier protein
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_20
unknown
|
Not on your lists |
comp(21692..22132)
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_143_curated_21
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22242..23867
|
Putative dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZXI1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJP71468.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
FAD dependent oxidoreductase; K07137
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_22
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23864..24811)
|
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V478_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ67094.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_23
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24924..25421
|
AsnC family transcriptional regulator n=1 Tax=Sphingomonas wittichii RepID=UPI0002E1DC71
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABQ67093.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_24
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25435..25743)
|
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V972_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:KKC26199.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_25
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26091..26996)
|
epimerase n=1 Tax=Sphingomonas elodea RepID=UPI000263107D
Epimerase {ECO:0000313|EMBL:AJP71342.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
NAD-dependent epimerase/dehydratase
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_26
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26993..28099)
|
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000313|EMBL:AJP71341.1}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
gamma-glutamyl kinase; K00931 glutamate 5-kinase [EC:2.7.2.11]
glutamate 5-kinase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B79AC6
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_27
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28167..29264)
|
putative permease n=1 Tax=Sphingomonas elodea RepID=UPI0002631078
Permease {ECO:0000313|EMBL:AJP71338.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
YjgP/YjgQ family permease; K11720 lipopolysaccharide export system permease protein
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_28
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29261..30475)
|
putative permease n=1 Tax=Sphingomonas elodea RepID=UPI0002631079
Permease {ECO:0000313|EMBL:AJP74289.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
YjgP/YjgQ family permease
|
|
SCNpilot_cont_300_bf_scaffold_143_curated_29
unknown
|
Not on your lists |
comp(30604..31263)
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_143_curated_30
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31366..32415
|
GTPase CgtA n=1 Tax=Sphingomonas elodea RepID=UPI000263107A
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
obgE; GTPase ObgE; K03979 GTP-binding protein
|