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SCNpilot_cont_300_bf_scaffold_143_curated_13

Organism: scnpilot_dereplicated_Sphingomonas_2

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: 15889..16158

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L27 n=1 Tax=Sphingomonas elodea RepID=UPI0002631086 similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 89.0
  • Bit_score: 174
  • Evalue 4.40e-41
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 89.0
  • Bit_score: 166
  • Evalue 1.70e-38
rpmA; 50S ribosomal protein L27 similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 89.0
  • Bit_score: 155
  • Evalue 1.10e-35

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Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGGCACATAAGAAGGCAGGCGGCTCTTCGCGTAACGGTCGTGATTCGGCCGGCCGTCGTCTCGGCGTGAAGAAGTTCGGTGGCGAGCTCGCGGTTGCGGGCAACATCCTCGTGCGCCAGCGCGGCACCAAATTCTATCCGGGCGTGAACGTGGGCATGGGCAAGGACCATACTCTTTTCGCGCTCGTGGACGGCCGCGTGTCGTTCAAGGAAGGCAAGCTTGGCCGCAAGTTCTGTTCGGTAGACATGATTGCGGAGGCTGCCGAGTAA
PROTEIN sequence
Length: 90
MAHKKAGGSSRNGRDSAGRRLGVKKFGGELAVAGNILVRQRGTKFYPGVNVGMGKDHTLFALVDGRVSFKEGKLGRKFCSVDMIAEAAE*