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SCNpilot_cont_300_bf_scaffold_788_curated_15

Organism: scnpilot_dereplicated_Sphingomonas_2

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: comp(12883..13422)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D5F25A related cluster n=1 Tax=unknown RepID=UPI0003D5F25A similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 179.0
  • Bit_score: 276
  • Evalue 1.70e-71
RNA polymerase sigma70 {ECO:0000313|EMBL:AHE51970.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 179.0
  • Bit_score: 276
  • Evalue 2.30e-71
Putative RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 174.0
  • Bit_score: 158
  • Evalue 1.60e-36

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Taxonomy

Sphingomonas sanxanigenens → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGCGAGCGAACGAGGAAGCGCTGCGCGGGTTGATGATCGATGGGCTGGCCGGCGATGCCGCCTCCCATGCGGCATTGCTGCGCCTGCTCGTACCCCTGCTGCGCGGCTTCTTCCGGCGGCGCGCGAACGGCTCCGATGACGATATCGAGGATCTGGTGCAGGAAACCCTGATCGCGGTGCACACCCGCCGCGCGACCTATGACCGCGAACGCGCCTTCACGGCGTGGCTGTTCGCGATCGCCCGCTACAAGATGGTCGATCATTTTCGTCGCACCTGCCGTCTACAGCCAATCGAAGGGCTGGAGGAAAGCCTGTTCGCAGAGGACTTCGAAGATGCCACGACCGCCCGGCTGGACATCGAAGATCTCCTGTCGACGCTGCCGCCCAAACAGGCCCGCGCAATCCGGGCGACGCGCATCGAAGGCCTGAGCGTCGCCGAGGCGGCAAAGGCCGGCGGCATCGGCGAATCCGACCTGAAGGTTTCCGTGCATAGGGGGTTGAAGATGCTGATCGCGCGGATCCAGGGAGGCGCGCGATGA
PROTEIN sequence
Length: 180
MRANEEALRGLMIDGLAGDAASHAALLRLLVPLLRGFFRRRANGSDDDIEDLVQETLIAVHTRRATYDRERAFTAWLFAIARYKMVDHFRRTCRLQPIEGLEESLFAEDFEDATTARLDIEDLLSTLPPKQARAIRATRIEGLSVAEAAKAGGIGESDLKVSVHRGLKMLIARIQGGAR*