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SCNpilot_cont_300_bf_scaffold_788_curated_29

Organism: scnpilot_dereplicated_Sphingomonas_2

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: 22900..23112

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding protein family protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z5K7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 68.0
  • Bit_score: 67
  • Evalue 6.00e-09
Cold-shock DNA-binding protein family protein {ECO:0000313|EMBL:KHS48337.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 66.0
  • Bit_score: 70
  • Evalue 1.30e-09
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 57.0
  • Bit_score: 65
  • Evalue 9.40e-09

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGCCAACCGGGACTGTCTGCTTCTATCACAGGGAAGGCGGGTTCGGCGTGATCCGTCCTGACCGCGCCGGTGCCGATGCGTTTGTCCATTCGAGCGCGGTGCAGGCGTCCGGCCTGGAAAGCCTTTGTGCGGCTTCGCGGGTAACCTATGTATTGCGGACCGATCAGCGCGGCCAATGTTGCGCCCATGACCTTGTGATTGTGAATGCGTGA
PROTEIN sequence
Length: 71
MPTGTVCFYHREGGFGVIRPDRAGADAFVHSSAVQASGLESLCAASRVTYVLRTDQRGQCCAHDLVIVNA*