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SCNpilot_cont_300_bf_scaffold_465_curated_26

Organism: scnpilot_dereplicated_Sphingomonas_2

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: 31583..32062

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030EA7DB similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 159.0
  • Bit_score: 310
  • Evalue 9.20e-82
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 159.0
  • Bit_score: 299
  • Evalue 2.30e-78
rplM; 50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 159.0
  • Bit_score: 287
  • Evalue 2.60e-75

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGAAGGCGCTGATGAAGACCACCAAGTCGGCCAAGCCGGCCGAGGTGGAGAAGAAGTGGCACATCGTCGATGCCGACGGCCTGATCGTCGGCCGCGCTGCCGTCGTGATCGCCAACGTCCTGCGCGGCAAGCACAAGACGAGCTTCACCCCGCACGTCGATTGCGGTGACAATGTCATCGTCATCAACGCGGACAAGATCCGGTTCACCGGCAAGAAGCTGGCCCAGAAGGTGTACTACAAGCACACCGGCTATGCGGGCGGCATCAAGGGGATCACCGCGGGCAAGGTGCTCGAGGGTCGTTTCCCGGAGCGCGTGCTCGAAAAGGCCGTGGAGCGCATGATCCCGCGCGGTCCGCTGGGCCGCCAGCAGATGCGCAACCTGCGCATCTACAACGGTGCTGAGCATCCCCACGAAGCGCAGAACCCCGAGGTCCTCGACATCGCCGGCATGAGCCGCAAGAACAAGGTGGGCGCATAA
PROTEIN sequence
Length: 160
MKALMKTTKSAKPAEVEKKWHIVDADGLIVGRAAVVIANVLRGKHKTSFTPHVDCGDNVIVINADKIRFTGKKLAQKVYYKHTGYAGGIKGITAGKVLEGRFPERVLEKAVERMIPRGPLGRQQMRNLRIYNGAEHPHEAQNPEVLDIAGMSRKNKVGA*