ggKbase home page

SCNpilot_cont_300_bf_scaffold_37_curated_3

Organism: scnpilot_dereplicated_Sphingomonas_2

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: 5441..5830

Top 3 Functional Annotations

Value Algorithm Source
transposase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C0A3 similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 129.0
  • Bit_score: 262
  • Evalue 3.00e-67
Transposase {ECO:0000313|EMBL:EIZ77260.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 129.0
  • Bit_score: 254
  • Evalue 8.90e-65
IS4 family transposase similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 129.0
  • Bit_score: 245
  • Evalue 1.20e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. Rr 2-17 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGAACACCAAGCTCCATGCCGTCACCGACGCCAACGGCCGCCCTTTGAGCTTCTTCATGACCGCCGGCCAGGTCAGCGACTATATCGGTGCAGCAGCCCTGCTGGACGAATTGCCAAAGGCTCAATGGCTGCTCGGCGACCGGGGCTATGATGCTGACTGGTTCAGGGATGCGCTGCAGGAGAAAGGCATAAGGCCCTGCATCCCGGGCCGGAAATCGCGCAACGAGCCCATCAAATACGACAAGCGCCGCTACAGACGCCGCAATCGCATTGAGAGCATGTTCGGCCGCCTCAAGGACTGGCGCCGCGTCGCTACCCGTTACGACCGCTGCCCCACCGCCTTCTTCTCCGCCATCGCGCTTGCCGCCACCATCATCTTCTGGCTATGA
PROTEIN sequence
Length: 130
MNTKLHAVTDANGRPLSFFMTAGQVSDYIGAAALLDELPKAQWLLGDRGYDADWFRDALQEKGIRPCIPGRKSRNEPIKYDKRRYRRRNRIESMFGRLKDWRRVATRYDRCPTAFFSAIALAATIIFWL*