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SCNpilot_cont_300_bf_scaffold_37_curated_15

Organism: scnpilot_dereplicated_Sphingomonas_2

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: comp(18016..18240)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=1 Tax=Sphingomonas RepID=UPI0002631DAC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 74.0
  • Bit_score: 148
  • Evalue 2.80e-33
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270, ECO:0000313|EMBL:AJP71401.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 74.0
  • Bit_score: 148
  • Evalue 4.00e-33
rpsR; ribosomal protein S18; K02963 small subunit ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 74.0
  • Bit_score: 144
  • Evalue 9.80e-33

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 225
ATGGCACGCCCGTTTTTCCGCCGCCGCAAGAGCTGCCCCTTCTCCGCGAAGGACGCTCCCCGGATCGATTACAAGGACGTCCGTCTGCTCCAGGGCTTCGTCTCTGAGCGCGGCAAGATCGTCCCGTCGCGTATCACTTCGGTGAGCGCCAAGAAGCAGCGCGAGCTGGCCCAGGCCATCAAGCGCGCCCGTCACCTGGGCCTGCTGCCCTACATCGTTAAGTAA
PROTEIN sequence
Length: 75
MARPFFRRRKSCPFSAKDAPRIDYKDVRLLQGFVSERGKIVPSRITSVSAKKQRELAQAIKRARHLGLLPYIVK*