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SCNpilot_cont_300_bf_scaffold_32_curated_25

Organism: scnpilot_dereplicated_Sphingomonas_2

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: 32887..33183

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F19EFA similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 98.0
  • Bit_score: 179
  • Evalue 2.00e-42
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373, ECO:0000313|EMBL:AJP73924.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 98.0
  • Bit_score: 176
  • Evalue 2.30e-41
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 83.5
  • Coverage: 97.0
  • Bit_score: 169
  • Evalue 6.40e-40

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
ATGTCGCGCATTTGCGAGCTGACCGGCAAGGGCCGGCAGGTGGGTAACAACGTTTCCCACGCCAACAACAAGACCAAGCGTACGTTCCTGCCCAACCTGCAGAACGTCACGCTGATCAGCGATGCGCTGGGCCGCAGCGTGCGCCTGCGCGTGTCGACCCACGGCCTGCGCTCGGTCGAGCACAATGGCGGCCTCGACAACTGGCTGCTCAAGACCAGCGACGACGATCTGTCGCTGCGCGCCCGCCGCCTGAAGCGCGAAGTGCGCAAGGCGTCGGCCGAGAAGACCGCGGCCTAA
PROTEIN sequence
Length: 99
MSRICELTGKGRQVGNNVSHANNKTKRTFLPNLQNVTLISDALGRSVRLRVSTHGLRSVEHNGGLDNWLLKTSDDDLSLRARRLKREVRKASAEKTAA*