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SCNpilot_cont_300_bf_scaffold_355_curated

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Displaying items 121-136 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_355_curated_121
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(120332..120997)
DNA (666bp) protein (222aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sou
lipoate-protein ligase B; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181]
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000373B57F
SCNpilot_cont_300_bf_scaffold_355_curated_122
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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121079..121897
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036D9E2E
Uncharacterized protein {ECO:0000313|EMBL:AIT06491.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_355_curated_123
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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121894..122640
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000376447C
Uncharacterized protein {ECO:0000313|EMBL:KHA64430.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_355_curated_124
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(122610..123203)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036A54D1
GCN5 family acetyltransferase {ECO:0000313|EMBL:AIT06490.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
N-acetyltransferase GCN5
SCNpilot_cont_300_bf_scaffold_355_curated_125
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(123211..124053)
DNA (843bp) protein (281aa)
Coproporphyrinogen oxidase {ECO:0000256|SAAS:SAAS00122066}; EC=1.3.3.3 {ECO:0000256|SAAS:SAAS00122066};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hemF; coproporphyrinogen III oxidase (EC:1.3.3.3); K00228 coproporphyrinogen III oxidase [EC:1.3.3.3]
coproporphyrinogen III oxidase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B776C7
SCNpilot_cont_300_bf_scaffold_355_curated_126
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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124196..125590
DNA (1395bp) protein (465aa)
amino acid permease n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000378D61C
Amino acid permease {ECO:0000313|EMBL:KHA64771.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family
SCNpilot_cont_300_bf_scaffold_355_curated_127
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125688..128375)
DNA (2688bp) protein (896aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
Aconitate hydratase 1 n=1 Tax=Sphingomonas sp. S17 RepID=F3WYS1_9SPHN
aconitate hydratase 1
SCNpilot_cont_300_bf_scaffold_355_curated_128
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128567..129889)
DNA (1323bp) protein (441aa)
arabinose ABC transporter permease n=1 Tax=Sphingomonas melonis RepID=UPI00037E5F03
Sphingomonas taxi strain 30a NODE_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29652.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
general substrate transporter
SCNpilot_cont_300_bf_scaffold_355_curated_129
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130005..131030
DNA (1026bp) protein (342aa)
cytochrome O ubiquinol oxidase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000372357E
Sphingomonas taxi strain 30a NODE_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29687.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
cyoA; Ubiquinol oxidase, subunit II
SCNpilot_cont_300_bf_scaffold_355_curated_130
Sphingomonas sp. NX-3, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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131035..133032
DNA (1998bp) protein (666aa)
cytochrome O ubiquinol oxidase n=1 Tax=Sphingomonas elodea RepID=UPI00026310C1
Cytochrome BO oxidase subunit I {ECO:0000313|EMBL:AHL30240.1}; TaxID=863935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. NX-3.;"
cytochrome o ubiquinol oxidase, subunit I
SCNpilot_cont_300_bf_scaffold_355_curated_131
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133038..133667
DNA (630bp) protein (210aa)
cytochrome c oxidase, subunit III; K02299 cytochrome o ubiquinol oxidase subunit III [EC:1.10.3.-]
cytochrome O ubiquinol oxidase n=1 Tax=Sphingomonas elodea RepID=UPI00026310C2
Cytochrome o ubiquinol oxidase subunit III {ECO:0000313|EMBL:AIT07003.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_355_curated_132
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133664..134053
DNA (390bp) protein (130aa)
cytochrome O ubiquinol oxidase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D5ACD5
Cytochrome C oxidase subunit III {ECO:0000313|EMBL:AIT07004.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
cyoD; cytochrome o ubiquinol oxidase subunit IV
SCNpilot_cont_300_bf_scaffold_355_curated_133
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134050..134718
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B588CD
Surfeit locus 1 {ECO:0000313|EMBL:EZP51762.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
surfeit locus 1 family protein; K14998 surfeit locus 1 family protein
SCNpilot_cont_300_bf_scaffold_355_curated_134
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134715..136013
DNA (1299bp) protein (433aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
two-component sensor histidine kinase; K15011 two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035F2A1B
SCNpilot_cont_300_bf_scaffold_355_curated_135
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136010..136540
DNA (531bp) protein (177aa)
chemotaxis protein CheY n=1 Tax=Sphingomonas melonis RepID=UPI000368A773
Sphingomonas taxi strain 30a NODE_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28021.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Fis family two component transcriptional regulator
SCNpilot_cont_300_bf_scaffold_355_curated_136
unknown

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comp(136576..136644)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying items 121-136 of 136 in total

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