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SCNpilot_cont_300_bf_scaffold_355_curated

Search features with annotation key words

Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_355_curated_1
unknown

Not on your lists

comp(98..319)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_355_curated_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(332..1087)
DNA (756bp) protein (252aa)
Phosphoadenylyl-sulfate reductase (thioredoxin) {ECO:0000256|SAAS:SAAS00089161}; EC=1.8.4.8 {ECO:0000256|SAAS:SAAS00089161};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
phosphoadenosine phosphosulfate reductase (EC:1.8.4.8)
phosphoadenosine phosphosulfate reductase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA64E
SCNpilot_cont_300_bf_scaffold_355_curated_3

Not on your lists

comp(1080..1508)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1WAS8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AGU11786.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_355_curated_4
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1501..3135)
DNA (1635bp) protein (545aa)
sulfite reductase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024885BB
nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein
Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein {ECO:0000313|EMBL:AGH51365.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_300_bf_scaffold_355_curated_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3135..3431)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Sphingomonas RepID=UPI0002882142
Sphingomonas taxi strain 30a NODE_60, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28522.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_355_curated_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3428..4216)
DNA (789bp) protein (263aa)
CysG n=1 Tax=Sphingomonas melonis RepID=UPI00037F5DA1
Sphingomonas taxi strain 30a NODE_60, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28523.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
uroporphyrinogen-III C-methyltransferase
SCNpilot_cont_300_bf_scaffold_355_curated_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4348..6168
DNA (1821bp) protein (607aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003706FEB
DNA, contig: SP614 {ECO:0000313|EMBL:GAN12920.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_355_curated_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6227..7639)
DNA (1413bp) protein (471aa)
Succinylglutamate-semialdehyde dehydrogenase {ECO:0000256|SAAS:SAAS00007761}; EC=1.2.1.71 {ECO:0000256|SAAS:SAAS00007761};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
succinylglutamate-semialdehyde dehydrogenase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036A7D19
astD; succinylglutamic semialdehyde dehydrogenase
SCNpilot_cont_300_bf_scaffold_355_curated_9
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7687..9078)
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6C8D4
Selenoprotein O {ECO:0000313|EMBL:AIT06185.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_355_curated_10
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9189..9710)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAP5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EDL49300.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
SCNpilot_cont_300_bf_scaffold_355_curated_11
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9922..10797
DNA (876bp) protein (292aa)
alpha/beta hydrolase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B38CCA
Alpha/beta hydrolase {ECO:0000313|EMBL:KHA65517.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
putative alpha/beta hydrolase
SCNpilot_cont_300_bf_scaffold_355_curated_12
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10848..12002
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036BA386
Glycosyl transferase family 1 {ECO:0000313|EMBL:KHA65500.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
group 1 glycosyl transferase
SCNpilot_cont_300_bf_scaffold_355_curated_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12087..13490
DNA (1404bp) protein (468aa)
2-nitropropane dioxygenase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F5E54
Sphingomonas taxi strain 30a NODE_60, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28515.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
2-nitropropane dioxygenase
SCNpilot_cont_300_bf_scaffold_355_curated_14
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13588..14187
DNA (600bp) protein (200aa)
Glutamine amidotransferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RY77_9SPHN
glutamine amidotransferase
Glutamine amidotransferase {ECO:0000313|EMBL:AGH48700.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_300_bf_scaffold_355_curated_15
unknown

Not on your lists

14282..14458
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_355_curated_16
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14638..15636)
DNA (999bp) protein (333aa)
2-hydroxyacid dehydrogenase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037B940F
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KHA65496.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
glyoxylate reductase
SCNpilot_cont_300_bf_scaffold_355_curated_17
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15733..16221
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000367532B
Bacterial SH3 domain protein {ECO:0000313|EMBL:EZP55322.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_355_curated_18
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16218..17063
DNA (846bp) protein (282aa)
nicotinate-nucleotide pyrophosphorylase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036A432A
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:GAO38057.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
nicotinate-nucleotide pyrophosphorylase
SCNpilot_cont_300_bf_scaffold_355_curated_19
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17120..17548
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000363920D
Uncharacterized protein {ECO:0000313|EMBL:EZP52650.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
SCNpilot_cont_300_bf_scaffold_355_curated_20
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17545..18264
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003683298
Sphingomonas taxi strain 30a NODE_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27282.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
ribonuclease T2
SCNpilot_cont_300_bf_scaffold_355_curated_21
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18302..20431)
DNA (2130bp) protein (710aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036AF70A
TonB-dependent receptor {ECO:0000313|EMBL:KHA63905.1}; Flags: Fragment;; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
TonB-dependent receptor-like protein; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_300_bf_scaffold_355_curated_22
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20502..20714)
DNA (213bp) protein (71aa)
membrane protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA125
Membrane protein {ECO:0000313|EMBL:AIT05439.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_355_curated_23
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20843..22087)
DNA (1245bp) protein (415aa)
N-succinylarginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_01172, ECO:0000256|SAAS:SAAS00074425}; EC=3.5.3.23 {ECO:0000256|HAMAP-Rule:MF_01172, ECO:0000256|SAAS:SAAS00074418};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
N-succinylarginine dihydrolase (EC:3.5.3.23); K01484 succinylarginine dihydrolase [EC:3.5.3.23]
N-succinylarginine dihydrolase n=1 Tax=Sphingomonas sp. S17 RepID=F3WSM3_9SPHN
SCNpilot_cont_300_bf_scaffold_355_curated_24
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22087..23103)
DNA (1017bp) protein (339aa)
arginine succinyltransferase (EC:2.3.1.109); K00673 arginine N-succinyltransferase [EC:2.3.1.109]
arginine N-succinyltransferase n=1 Tax=Sphingomonas melonis RepID=UPI0003741D13
Sphingomonas taxi strain 30a NODE_17, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29980.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_355_curated_25
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23100..24242)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B7457D
Uncharacterized protein {ECO:0000313|EMBL:AIT05442.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_355_curated_26
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24318..25253)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036B7413
Uncharacterized protein {ECO:0000313|EMBL:EZP56722.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein; K07283 putative salt-induced outer membrane protein
SCNpilot_cont_300_bf_scaffold_355_curated_27
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25323..25796)
DNA (474bp) protein (158aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
nudH; putative (di)nucleoside polyphosphate hydrolase; K08311 putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
RNA pyrophosphohydrolase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036A3393
SCNpilot_cont_300_bf_scaffold_355_curated_28
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25866..26849)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000378B190
Sphingomonas taxi strain 30a NODE_17, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29984.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Alpha/beta hydrolase fold-3 protein
SCNpilot_cont_300_bf_scaffold_355_curated_29
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27027..28895
DNA (1869bp) protein (623aa)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289472A
2-oxoglutarate--ferredoxin oxidoreductase alpha subunit {ECO:0000313|EMBL:GAO39693.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein
SCNpilot_cont_300_bf_scaffold_355_curated_30
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28912..29946
DNA (1035bp) protein (345aa)
2-oxoacid ferredoxin oxidoreductase subunit beta n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289EDA0
2-oxoacid:ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:AJP71540.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
2-oxoglutarate ferredoxin oxidoreductase subunit beta
Displaying items 1-30 of 136 in total

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