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SCNpilot_cont_300_bf_scaffold_487_curated

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_487_curated_1
unknown

Not on your lists

458..793
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_487_curated_2
unknown

Not on your lists

1525..2013
DNA (489bp) protein (163aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_487_curated_3
unknown

Not on your lists

2013..2300
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_487_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2346..2939
DNA (594bp) protein (198aa)
Putative chitinase n=1 Tax=Sphingomonas sp. S17 RepID=F3WY72_9SPHN
Chitinase class I {ECO:0000313|EMBL:EKY30618.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
glycoside hydrolase; K03791 putative chitinase
SCNpilot_cont_300_bf_scaffold_487_curated_5
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3156..3425
DNA (270bp) protein (90aa)
Uncharacterized protein {ECO:0000313|EMBL:KHA63448.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
SCNpilot_cont_300_bf_scaffold_487_curated_6
unknown

Not on your lists

3432..3698
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_487_curated_7
unknown

Not on your lists

comp(3724..3912)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_487_curated_8
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3924..5006)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJ19_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KKC24455.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
SCNpilot_cont_300_bf_scaffold_487_curated_9

Not on your lists

comp(5182..5559)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI00026321FE
Uncharacterized protein family {ECO:0000313|EMBL:AGU09920.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_487_curated_10
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5595..5783)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI00026321FF
Uncharacterized protein {ECO:0000313|EMBL:AHE51748.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_487_curated_11
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6479..7378)
DNA (900bp) protein (300aa)
metal-dependent hydrolase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000288D97E
Metal-dependent hydrolase {ECO:0000313|EMBL:EJU13454.1}; Flags: Fragment;; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
amidohydrolase 2; K07045
SCNpilot_cont_300_bf_scaffold_487_curated_12
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7563..7973)
DNA (411bp) protein (137aa)
blue-light sensor BLUF n=1 Tax=Sphingomonas RepID=UPI0002894F4B
DNA, contig: SP644 {ECO:0000313|EMBL:GAN14786.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
BLUF domain-containing protein
SCNpilot_cont_300_bf_scaffold_487_curated_13
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8258..8842)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B480E4
Putative secreted protein {ECO:0000313|EMBL:AJA09232.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
SCNpilot_cont_300_bf_scaffold_487_curated_14
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8973..9284)
DNA (312bp) protein (104aa)
DNA repair protein radc n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9S1P1_9RHOB
DNA repair protein RadC {ECO:0000313|EMBL:KJV40914.1}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. KM4.;"
DNA repair protein; K03630 DNA repair protein RadC
SCNpilot_cont_300_bf_scaffold_487_curated_15
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9832..14064)
DNA (4233bp) protein (1411aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6DE85
Uncharacterized protein {ECO:0000313|EMBL:EGL63579.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_487_curated_16
unknown

Not on your lists

14723..14974
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_487_curated_17
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15250..16215
DNA (966bp) protein (322aa)
putative secreted peptidyl prolyl cis-trans isomerase, cyclophilin type; K01802 peptidylprolyl isomerase [EC:5.2.1.8]
Putative secreted peptidyl prolyl cis-trans isomerase, cyclophilin type n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSQ0_SPHAL
Putative secreted peptidyl prolyl cis-trans isomerase, cyclophilin type {ECO:0000313|EMBL:ABF53322.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
SCNpilot_cont_300_bf_scaffold_487_curated_18
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16220..16801)
DNA (582bp) protein (194aa)
ABC transporter n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA748
ABC transporter {ECO:0000313|EMBL:KHA64906.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
ABC transporter auxiliary component-like protein
SCNpilot_cont_300_bf_scaffold_487_curated_19
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16810..17775)
DNA (966bp) protein (322aa)
Mce related family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZE1_9SPHN
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11951.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
mammalian cell entry domain-containing protein; K02067 putative ABC transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_487_curated_20
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17775..18593)
DNA (819bp) protein (273aa)
iron ABC transporter ATP-binding protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000360BD6C
Sphingomonas taxi strain 30a NODE_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26246.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
ABC transporter-like protein; K02065 putative ABC transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_487_curated_21
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18593..19693)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000378B866
ABC transporter permease {ECO:0000313|EMBL:KHA64898.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_487_curated_22
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19746..21011)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036A31B2
Uncharacterized protein {ECO:0000313|EMBL:AHE56845.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_487_curated_23
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21091..24306)
DNA (3216bp) protein (1072aa)
acriflavin resistance protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4F5AE
AcrB/AcrD/AcrF family protein {ECO:0000313|EMBL:EZP55840.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
acrB; hydrophobic/amphiphilic exporter-1
SCNpilot_cont_300_bf_scaffold_487_curated_24
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24315..25487)
DNA (1173bp) protein (391aa)
secretion protein HylD n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5F0BB
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11946.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hlyD; HlyD-family secretion protein
SCNpilot_cont_300_bf_scaffold_487_curated_25
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25687..26400
DNA (714bp) protein (238aa)
membrane protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5C4F6
hypothetical protein
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11945.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_300_bf_scaffold_487_curated_26
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26457..26714)
DNA (258bp) protein (86aa)
Transglycosylase associated family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZE8_9SPHN
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11944.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_487_curated_27
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26941..27240)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA753
Uncharacterized protein {ECO:0000313|EMBL:AJP73325.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_487_curated_28
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27349..27579)
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZF0_9SPHN
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11942.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_300_bf_scaffold_487_curated_29
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27728..28831
DNA (1104bp) protein (368aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
mnmA; tRNA-specific 2-thiouridylase MnmA; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-]
thiouridylase n=1 Tax=Sphingomonas melonis RepID=UPI00035C2426
SCNpilot_cont_300_bf_scaffold_487_curated_30
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28955..30505)
DNA (1551bp) protein (517aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036D7006
Multidrug resistance protein B {ECO:0000313|EMBL:AIT07119.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
EmrB/QacA family drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
Displaying items 1-30 of 64 in total

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