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SCNpilot_cont_300_bf_scaffold_489_curated

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_489_curated_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..407
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=T0H5S7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP69771.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_489_curated_2
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

937..1431
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J2J6S2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJL56753.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
Protein-S-isoprenylcysteineO-methyltransferase
SCNpilot_cont_300_bf_scaffold_489_curated_3
bacterium YEK0313, Bacteria

Not on your lists

1797..2324
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XJD8_VARPD
Uncharacterized protein {ECO:0000313|EMBL:CEJ16012.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_489_curated_4
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2421..2630
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:KHL24311.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
SCNpilot_cont_300_bf_scaffold_489_curated_5
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2874..3332)
DNA (459bp) protein (153aa)
UPF0059 membrane protein yebN n=1 Tax=Exiguobacterium sp. S17 RepID=S3FDQ2_9BACL
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_489_curated_6
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3820..4029
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:KHL24311.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
SCNpilot_cont_300_bf_scaffold_489_curated_7
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4040..4525)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00030F7BF8
Uncharacterized protein {ECO:0000313|EMBL:CCW17302.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_489_curated_8
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4709..5338
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VA32_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO90459.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_489_curated_9
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5338..6345
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036E73E0
Uncharacterized protein {ECO:0000313|EMBL:KHL24197.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_489_curated_10
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6411..7055
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A3CA
Uncharacterized protein {ECO:0000313|EMBL:EZP69785.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_489_curated_11
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7098..8198
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HDR8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB10253.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_489_curated_12
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8270..8731
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INS2_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ60665.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
SCNpilot_cont_300_bf_scaffold_489_curated_13
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9192..9494
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI0003616030
twitching motility protein PilT; K07062
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SCNpilot_cont_300_bf_scaffold_489_curated_14
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9736..10947
DNA (1212bp) protein (404aa)
ATPase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MNW9_9SPHN
ATPase {ECO:0000313|EMBL:CCW17312.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_489_curated_15
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10944..12356
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MPD9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CCW17313.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_489_curated_16
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12395..13201
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C599
Uncharacterized protein {ECO:0000313|EMBL:KKC25051.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_489_curated_17
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13338..14978
DNA (1641bp) protein (547aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4D16D
ATP-binding protein {ECO:0000313|EMBL:KHS49356.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_489_curated_18
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15192..15896
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036C9486
Uncharacterized protein {ECO:0000313|EMBL:EZP70218.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_489_curated_19
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15893..16255
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=T0GS75_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KER34741.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lucknowense F2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_489_curated_20
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16255..16449
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002F07270
Uncharacterized protein {ECO:0000313|EMBL:EJU13026.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
SCNpilot_cont_300_bf_scaffold_489_curated_21
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16528..17427
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0I0C9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB05090.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_489_curated_22
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17438..17794
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VG78_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ71294.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_300_bf_scaffold_489_curated_23
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17807..18514
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036E2623
Uncharacterized protein {ECO:0000313|EMBL:EHJ58406.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_489_curated_24
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18511..18807
DNA (297bp) protein (99aa)
Uncharacterized protein n=3 Tax=Sphingomonadaceae RepID=M4SN32_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQB19660.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
SCNpilot_cont_300_bf_scaffold_489_curated_25
unknown

Not on your lists

18860..19087
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_489_curated_26
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19255..19695
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EQ90_9NOCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFT99676.1}; TaxID=1133849 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
SCNpilot_cont_300_bf_scaffold_489_curated_27
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19904..20407
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GDC8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJL20423.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_489_curated_28
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20838..21833
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZMB9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJL20431.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_489_curated_29
unknown

Not on your lists

22010..22348
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_489_curated_30
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22737..22961
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCEC4
Uncharacterized protein {ECO:0000313|EMBL:KEQ53743.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
hypothetical protein
Displaying items 1-30 of 54 in total

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