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SCNpilot_cont_300_bf_scaffold_277_curated

Search features with annotation key words

Displaying items 31-60 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_277_curated_31
unknown

Not on your lists

comp(29052..29351)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_32
unknown

Not on your lists

29604..29873
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_33
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30173..30895
DNA (723bp) protein (241aa)
transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A424
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:GAM00735.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
SCNpilot_cont_300_bf_scaffold_277_curated_34
unknown

Not on your lists

31316..31699
DNA (384bp) protein (128aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_35
unknown

Not on your lists

31699..32064
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_36
unknown

Not on your lists

32061..32282
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_37
unknown

Not on your lists

32285..32419
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_38
unknown

Not on your lists

32523..32618
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_39
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32630..33034
DNA (405bp) protein (135aa)
UPI00039D8AD1 related cluster n=1 Tax=unknown RepID=UPI00039D8AD1
Uncharacterized protein {ECO:0000313|EMBL:GAM00738.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_277_curated_40
unknown

Not on your lists

33027..33323
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_41
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33320..34240
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00036369B2
Phosphoadenosine phosphosulfate reductase {ECO:0000313|EMBL:KFC62732.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
SCNpilot_cont_300_bf_scaffold_277_curated_42
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34237..35154
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0GJF3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB03876.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_277_curated_43
Thioclava dalianensis, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35320..35517)
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Rhizobium meliloti RepID=F6E7K9_SINMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEP67793.1}; TaxID=1185766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava dalianensis.;"
SCNpilot_cont_300_bf_scaffold_277_curated_44
unknown

Not on your lists

35597..35833
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_45
unknown

Not on your lists

35835..36089
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_46
unknown

Not on your lists

36086..36325
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_47
unknown

Not on your lists

36480..37028
DNA (549bp) protein (183aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_48
unknown

Not on your lists

37025..37510
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_49
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37537..38814
DNA (1278bp) protein (426aa)
phage integrase family protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A066
Uncharacterized protein {ECO:0000313|EMBL:GAM00747.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_277_curated_50
unknown

Not on your lists

39436..40707
DNA (1272bp) protein (424aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_51
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40776..41243)
DNA (468bp) protein (156aa)
peptidase A24A, prepilin type IV; K02278 prepilin peptidase CpaA [EC:3.4.23.43]
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I8F9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB07965.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
SCNpilot_cont_300_bf_scaffold_277_curated_52
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41315..41956)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IE75_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB07964.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_277_curated_53
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41958..42929)
DNA (972bp) protein (324aa)
Tight adherence protein C n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IPT8_9SPHN
tight adherence protein C; K12511 tight adherence protein C
Tight adherence protein C {ECO:0000313|EMBL:CCA93440.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_300_bf_scaffold_277_curated_54
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42931..43932)
DNA (1002bp) protein (334aa)
Tight adherence protein B n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IPT9_9SPHN
tight adherence protein B; K12510 tight adherence protein B
Tight adherence protein B {ECO:0000313|EMBL:CCA93441.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_300_bf_scaffold_277_curated_55
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43929..45317)
DNA (1389bp) protein (463aa)
CpaF pilus assembly protein, ATPase CpaF n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0GVG2_9SPHN
CpaF pilus assembly protein, ATPase CpaF {ECO:0000313|EMBL:EQB07961.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
pilus assembly protein CpaF; K02283 pilus assembly protein CpaF
SCNpilot_cont_300_bf_scaffold_277_curated_56
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45317..46519)
DNA (1203bp) protein (401aa)
Pilus assembly protein CpaE n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IPU1_9SPHN
pilus assembly protein CpaE; K02282 pilus assembly protein CpaE
Pilus assembly protein CpaE {ECO:0000313|EMBL:CCA93443.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_300_bf_scaffold_277_curated_57
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46548..46859)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0GVF8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB07956.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_277_curated_58
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46849..48375)
DNA (1527bp) protein (509aa)
Flp pilus assembly protein secretin CpaC n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I8E9_9SPHN
Flp pilus assembly protein secretin CpaC {ECO:0000313|EMBL:EQB07955.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
pilus assembly protein CpaC; K02280 pilus assembly protein CpaC
SCNpilot_cont_300_bf_scaffold_277_curated_59
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48353..49255)
DNA (903bp) protein (301aa)
Pilus assembly protein CpaB n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IPU7_9SPHN
pilus assembly protein CpaB; K02279 pilus assembly protein CpaB
Pilus assembly protein CpaB {ECO:0000313|EMBL:CCA93449.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_300_bf_scaffold_277_curated_60
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49353..49583)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0H783_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB07953.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
pilus subunit protein PilA; K02651 pilus assembly protein Flp/PilA
Displaying items 31-60 of 108 in total

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