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SCNpilot_cont_300_bf_scaffold_277_curated

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_277_curated_1
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1265)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SUD0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KEZ17141.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_300_bf_scaffold_277_curated_2
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1265..1534)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MTJ5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CCW20084.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_277_curated_3
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1552..1749)
DNA (198bp) protein (66aa)
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_cont_300_bf_scaffold_277_curated_4
unknown

Not on your lists

comp(1754..2107)
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_5
unknown

Not on your lists

comp(2107..2271)
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039E6D8E
SCNpilot_cont_300_bf_scaffold_277_curated_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2268..2807)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000287B26B
Uncharacterized protein {ECO:0000313|EMBL:GAO54449.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_277_curated_7
unknown

Not on your lists

comp(2831..3133)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024897CF
SCNpilot_cont_300_bf_scaffold_277_curated_8
unknown

Not on your lists

comp(3130..3285)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_9
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3282..5228)
DNA (1947bp) protein (649aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA024 RepID=U8PVC4_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI73174.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_cont_300_bf_scaffold_277_curated_10
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5342..7834)
DNA (2493bp) protein (831aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A43A
Uncharacterized protein {ECO:0000313|EMBL:GAM00706.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_277_curated_11
Sphingomonas sp. BHC-A, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7838..10489)
DNA (2652bp) protein (884aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A439
Uncharacterized protein {ECO:0000313|EMBL:KEZ00364.1}; TaxID=322611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. BHC-A.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_277_curated_12
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10486..12495)
DNA (2010bp) protein (670aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM00708.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
SCNpilot_cont_300_bf_scaffold_277_curated_13
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12495..12938)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A437
Uncharacterized protein {ECO:0000313|EMBL:EPY03485.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
SCNpilot_cont_300_bf_scaffold_277_curated_14

Not on your lists

comp(12941..13375)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 878 RepID=B8R8L1_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACF98017.1}; TaxID=548895 species="Bacteria; environmental samples.;" source="uncultured bacterium 878.;"
SCNpilot_cont_300_bf_scaffold_277_curated_15
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13387..15603)
DNA (2217bp) protein (739aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A435
Uncharacterized protein {ECO:0000313|EMBL:GAM00711.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_277_curated_16

Not on your lists

comp(15600..16208)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B4A6D8
Marine sediment metagenome DNA, contig: S01H4_L05764 {ECO:0000313|EMBL:GAG86082.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_300_bf_scaffold_277_curated_17
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16219..16416)
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM00713.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
SCNpilot_cont_300_bf_scaffold_277_curated_18
unknown

Not on your lists

comp(16531..16971)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A433
SCNpilot_cont_300_bf_scaffold_277_curated_19
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16974..17903)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A432
Uncharacterized protein {ECO:0000313|EMBL:GAM00715.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_277_curated_20
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18125..19075)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B0S4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KFX28030.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_277_curated_21
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19065..19466)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A430
Uncharacterized protein {ECO:0000313|EMBL:GAM00717.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
SCNpilot_cont_300_bf_scaffold_277_curated_22
unknown

Not on your lists

comp(19463..19720)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_23
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19720..21393)
DNA (1674bp) protein (558aa)
phage head-tail connector protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A42F
Uncharacterized protein {ECO:0000313|EMBL:GAM00718.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
phage head-tail connector protein
SCNpilot_cont_300_bf_scaffold_277_curated_24
unknown

Not on your lists

comp(21446..22081)
DNA (636bp) protein (212aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_25
unknown

Not on your lists

comp(22092..22331)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A42D
SCNpilot_cont_300_bf_scaffold_277_curated_26
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22333..23907)
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A42C
Uncharacterized protein {ECO:0000313|EMBL:GAM00722.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_277_curated_27
unknown

Not on your lists

comp(23907..24521)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A42A
SCNpilot_cont_300_bf_scaffold_277_curated_28
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25635..27581)
DNA (1947bp) protein (649aa)
DNA primase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A429
DNA primase
DNA primase {ECO:0000313|EMBL:BAI73189.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_cont_300_bf_scaffold_277_curated_29
unknown

Not on your lists

comp(27578..27970)
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_277_curated_30
Gluconobacter oxydans, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27967..29055)
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B73BCF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFW00658.1}; TaxID=1224746 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter oxydans H24.;"
Displaying items 1-30 of 108 in total

View Taxonomy