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SCNpilot_cont_300_bf_scaffold_113_curated

Search features with annotation key words

Displaying items 1-30 of 354 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_113_curated_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102..599)
DNA (498bp) protein (166aa)
Putative DNA recombinase n=1 Tax=Gluconacetobacter sp. SXCC-1 RepID=F3SDX2_9PROT
Recombinase {ECO:0000313|EMBL:EZP65172.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
SCNpilot_cont_300_bf_scaffold_113_curated_2
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(896..1840)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0FZG7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA96770.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
beta-lactamase-like protein
SCNpilot_cont_300_bf_scaffold_113_curated_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1853..3163)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HPH0547 RepID=S3C508_9ACTO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
SCNpilot_cont_300_bf_scaffold_113_curated_4
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3168..5543)
DNA (2376bp) protein (792aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB5F3
TonB-dependent receptor {ECO:0000313|EMBL:AJR22487.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
TonB-dependent receptor-like protein
SCNpilot_cont_300_bf_scaffold_113_curated_5
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5664..6371)
DNA (708bp) protein (236aa)
Transcriptional regulator, GntR family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A426_STAND
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADH87846.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_300_bf_scaffold_113_curated_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6464..7327
DNA (864bp) protein (288aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconate delta-isomerase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z0Q6_SPHJU
Fumarylacetoacetate hydrolase family protein {ECO:0000313|EMBL:GAO52938.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
SCNpilot_cont_300_bf_scaffold_113_curated_7
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7353..8966
DNA (1614bp) protein (538aa)
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase n=1 Tax=Acidovorax sp. CF316 RepID=J0KJZ3_9BURK
FAD-monooxygenase {ECO:0000313|EMBL:KGD89978.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_113_curated_8
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8963..10276
DNA (1314bp) protein (438aa)
major facilitator superfamily transporter n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB5F0
Uncharacterized protein {ECO:0000313|EMBL:KKC27223.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
major facilitator superfamily transporter
SCNpilot_cont_300_bf_scaffold_113_curated_9
Pseudomonas sp. CFII68, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10273..11301
DNA (1029bp) protein (343aa)
vanillate monooxygenase subunit; K03862 vanillate monooxygenase [EC:1.14.13.82]
Vanillate monooxygenase n=1 Tax=Pseudomonas sp. CFII68 RepID=S6I8K7_9PSED
Vanillate monooxygenase {ECO:0000313|EMBL:EPJ97723.1}; TaxID=911243 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CFII68.;"
SCNpilot_cont_300_bf_scaffold_113_curated_10
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11395..13791
DNA (2397bp) protein (799aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z0R1_SPHJU
TonB-dependent receptor-like protein
Uncharacterized protein {ECO:0000313|EMBL:AJR22497.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
SCNpilot_cont_300_bf_scaffold_113_curated_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13841..15400)
DNA (1560bp) protein (520aa)
Amidohydrolase n=1 Tax=Pseudomonas syringae pv. avellanae str. ISPaVe013 RepID=K2T8Z8_PSESY
Amidohydrolase family protein {ECO:0000313|EMBL:ERK70500.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
amidohydrolase-family protein
SCNpilot_cont_300_bf_scaffold_113_curated_12
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15430..16614)
DNA (1185bp) protein (395aa)
Cytochrome P450 n=1 Tax=Caulobacter sp. AP07 RepID=J2PSY2_9CAUL
Cytochrome P450 {ECO:0000313|EMBL:EJL30817.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
cytochrome P450
SCNpilot_cont_300_bf_scaffold_113_curated_13
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16796..17719
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RZR0_9SPHN
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48292.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_113_curated_14
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17749..18831
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI00035DD6C6
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCNpilot_cont_300_bf_scaffold_113_curated_15
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18850..19788
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HGV9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA96773.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_300_bf_scaffold_113_curated_16
unknown

Not on your lists

20891..21085
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_113_curated_17
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21330..24335
DNA (3006bp) protein (1002aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HSH4_9SPHN
TonB-dependent Receptor Plug domain protein {ECO:0000313|EMBL:AJA11754.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_113_curated_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

24414..26138
DNA (1725bp) protein (575aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4FD67
feruloyl esterase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SCNpilot_cont_300_bf_scaffold_113_curated_19
unknown

Not on your lists

comp(26343..26513)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_113_curated_20
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26483..26830)
DNA (348bp) protein (116aa)
Toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM1 {ECO:0000313|EMBL:AKH42606.1}; EC=1.14.14.- {ECO:0000313|EMBL:AKH42606.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
vanillate monooxygenase (EC:1.14.13.82); K03862 vanillate monooxygenase [EC:1.14.13.82]
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002FF4D57
SCNpilot_cont_300_bf_scaffold_113_curated_21
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26933..29104)
DNA (2172bp) protein (724aa)
TonB-dependent receptor n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XP79_HIRBI
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACT60259.1}; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418).;"
SCNpilot_cont_300_bf_scaffold_113_curated_22
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29481..30224
DNA (744bp) protein (248aa)
Transcriptional regulator n=1 Tax=Pseudomonas sp. GM84 RepID=J2YNK1_9PSED
TetR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SCNpilot_cont_300_bf_scaffold_113_curated_23
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30337..31926
DNA (1590bp) protein (530aa)
monooxygenase FAD-binding protein; K05712 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00037923C3
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_cont_300_bf_scaffold_113_curated_24
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32061..33269
DNA (1209bp) protein (403aa)
Cytochrome P450 n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YHQ0_9BRAD
Cytochrome P450 {ECO:0000313|EMBL:EHR03973.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
cyp49; hypothetical protein
SCNpilot_cont_300_bf_scaffold_113_curated_25
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34683..35966
DNA (1284bp) protein (428aa)
HipA-like protein n=2 Tax=Rhizobium RepID=L0LQW9_RHITR
Phosphatidylinositol kinase {ECO:0000313|EMBL:KGD89184.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
HipA-like protein
SCNpilot_cont_300_bf_scaffold_113_curated_26
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35973..37355)
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003804894
Uncharacterized protein {ECO:0000313|EMBL:EGP54146.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_113_curated_27
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38179..38379
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KB10_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB33869.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
DNA-binding protein
SCNpilot_cont_300_bf_scaffold_113_curated_28
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38383..39684
DNA (1302bp) protein (434aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1]
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KKM1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB33868.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
SCNpilot_cont_300_bf_scaffold_113_curated_29
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40105..40971)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0GUL3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP72197.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
SCNpilot_cont_300_bf_scaffold_113_curated_30
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41180..41944
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7GT33_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZP72198.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
Hypothetical Protein
Displaying items 1-30 of 354 in total

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