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SCNpilot_cont_300_bf_scaffold_299_curated

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Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_299_curated_1
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1006..1359
DNA (354bp) protein (118aa)
TPR domain-containing protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CQ83_MYXFH
hypothetical protein
TPR domain-containing protein {ECO:0000313|EMBL:AEI65412.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
SCNpilot_cont_300_bf_scaffold_299_curated_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1369..3168)
DNA (1800bp) protein (600aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036EC202
Sphingomonas taxi strain 30a NODE_67, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26591.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
peptidase M24
SCNpilot_cont_300_bf_scaffold_299_curated_3
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3189..4109)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000365D172
Uncharacterized protein {ECO:0000313|EMBL:EZP51055.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_299_curated_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4529..6589
DNA (2061bp) protein (687aa)
ptrB; oligopeptidase B (EC:3.4.21.83); K01354 oligopeptidase B [EC:3.4.21.83]
peptidase S9 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B51D8E
Peptidase S9 {ECO:0000313|EMBL:AIT07253.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_299_curated_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6586..7146
DNA (561bp) protein (187aa)
membrane protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002882D71
Membrane protein {ECO:0000313|EMBL:AIT07252.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_299_curated_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7143..7544
DNA (402bp) protein (134aa)
thioesterase-like protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
thioesterase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B71D23
Thioesterase {ECO:0000313|EMBL:AIT07251.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_299_curated_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7565..7870)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI00028A377D
Uncharacterized protein {ECO:0000313|EMBL:AIT07215.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_299_curated_8
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7955..10624)
DNA (2670bp) protein (890aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
phosphoenolpyruvate carboxylase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3021F
phosphoenolpyruvate carboxylase
SCNpilot_cont_300_bf_scaffold_299_curated_9
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10751..11833
DNA (1083bp) protein (361aa)
alanine dehydrogenase (EC:1.4.1.1); K00259 alanine dehydrogenase [EC:1.4.1.1]
alanine dehydrogenase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B51433
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
SCNpilot_cont_300_bf_scaffold_299_curated_10
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11879..12922
DNA (1044bp) protein (348aa)
HrcA family transcriptional regulator n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B57BBE
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hrcA; heat-inducible transcription repressor; K03705 heat-inducible transcriptional repressor
SCNpilot_cont_300_bf_scaffold_299_curated_11
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12945..13484
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036053DE
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
grpE; molecular chaperone GrpE; K03687 molecular chaperone GrpE
SCNpilot_cont_300_bf_scaffold_299_curated_12
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13489..14712
DNA (1224bp) protein (408aa)
putative threonine synthase; K01733 threonine synthase [EC:4.2.3.1]
threonine synthase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5D4CB
Threonine synthase {ECO:0000313|EMBL:AIT06672.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_299_curated_13
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(14731..15186)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCBB5
Tax=RBG_16_Ignavibacteria_35_7_curated
SCNpilot_cont_300_bf_scaffold_299_curated_14
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15328..16161)
DNA (834bp) protein (278aa)
taurine dioxygenase; K03119 taurine dioxygenase [EC:1.14.11.17]
alpha-ketoglutarate-dependent taurine dioxygenase n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0E6C
Putative dioxygenase {ECO:0000313|EMBL:GAO40704.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
SCNpilot_cont_300_bf_scaffold_299_curated_15
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16236..16886
DNA (651bp) protein (217aa)
CRP/FNR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXB4_9SPHN
Putative CRP/FNR family transcriptional regulator {ECO:0000313|EMBL:GAO40705.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
CRP/FNR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_299_curated_16
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17876..18307
DNA (432bp) protein (144aa)
Rrf2 family transcriptional regulator n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDCEF
Sphingomonas taxi strain 30a NODE_68, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27727.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Rrf2 family protein
SCNpilot_cont_300_bf_scaffold_299_curated_17
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18353..18784)
DNA (432bp) protein (144aa)
large conductance mechanosensitive channel protein MscL n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037533AB
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
large conductance mechanosensitive channel protein
SCNpilot_cont_300_bf_scaffold_299_curated_18
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18893..19468
DNA (576bp) protein (192aa)
membrane protein n=1 Tax=Sphingomonas melonis RepID=UPI000381408B
Sphingomonas taxi strain 30a NODE_100, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27722.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
LemA family protein
SCNpilot_cont_300_bf_scaffold_299_curated_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19477..20370
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000379210B
Methanol dehydrogenase {ECO:0000313|EMBL:AIT06600.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein; K06872 uncharacterized protein
SCNpilot_cont_300_bf_scaffold_299_curated_20
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20370..21041
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000362D89A
Uncharacterized protein {ECO:0000313|EMBL:EZP54591.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein; K08988 putative membrane protein
SCNpilot_cont_300_bf_scaffold_299_curated_21
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21132..21575
DNA (444bp) protein (148aa)
ADP-ribose pyrophosphatase (EC:3.6.1.13); K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13]
NUDIX hydrolase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B47FFC
NUDIX hydrolase {ECO:0000313|EMBL:KHA64045.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
SCNpilot_cont_300_bf_scaffold_299_curated_22
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21554..21835)
DNA (282bp) protein (94aa)
ETC complex I subunit n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC041
ETC complex subunit I {ECO:0000313|EMBL:KHA64040.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_299_curated_23
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22060..24507)
DNA (2448bp) protein (816aa)
ATP-dependent helicase HrpB; K03579 ATP-dependent helicase HrpB [EC:3.6.4.13]
ATP-dependent helicase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5F3F4
ATP-dependent helicase {ECO:0000313|EMBL:AIT06604.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_300_bf_scaffold_299_curated_24
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24584..25567)
DNA (984bp) protein (328aa)
carbohydrate kinase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B41809
DNA, contig: SP604 {ECO:0000313|EMBL:GAN12122.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
PfkB protein
SCNpilot_cont_300_bf_scaffold_299_curated_25
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25612..26328
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036C7B98
Uncharacterized protein {ECO:0000313|EMBL:AIT06782.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_299_curated_26
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26325..26699
DNA (375bp) protein (125aa)
Putative lipoprotein n=1 Tax=Sphingomonas sp. S17 RepID=F3X0G3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAM00848.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_299_curated_27
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26788..27585)
DNA (798bp) protein (266aa)
phenazine biosynthesis PhzC/PhzF protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC8FC
PhzF family phenazine biosynthesis protein {ECO:0000313|EMBL:AIT07679.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
phenazine biosynthesis PhzC/PhzF protein; K06998
SCNpilot_cont_300_bf_scaffold_299_curated_28
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27602..28549)
DNA (948bp) protein (316aa)
Cation diffusion facilitator transporter family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2N1_9SPHN
Cation diffusion facilitator transporter family protein {ECO:0000313|EMBL:EZP50997.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
cation diffusion facilitator family transporter
SCNpilot_cont_300_bf_scaffold_299_curated_29
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28546..29127)
DNA (582bp) protein (194aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
pdxH; pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5); K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000287B5DF
SCNpilot_cont_300_bf_scaffold_299_curated_30
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29231..29974
DNA (744bp) protein (248aa)
Probable transcriptional regulatory protein SUS17_3945 n=1 Tax=Sphingomonas sp. S17 RepID=F3X3C5_9SPHN
Probable transcriptional regulatory protein SP5_018_00080 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
Displaying items 1-30 of 80 in total

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