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SCNpilot_cont_300_bf_scaffold_2266_curated_6

Organism: scnpilot_dereplicated_Sphingomonas_1

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 2617..3096

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Sphingomonas elodea RepID=UPI0002631A33 similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 159.0
  • Bit_score: 302
  • Evalue 1.90e-79
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 159.0
  • Bit_score: 306
  • Evalue 2.40e-80
rplM; 50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 159.0
  • Bit_score: 285
  • Evalue 7.60e-75

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGAAGGCGCTGATGAAGACCACCAAGTCGGCCAAGCCGCATGAGGTGGAAAAGAAGTGGCATATCGTCGATGCCGACGGCCTGGTGGTCGGTCGCGCGGCGGTGGTGATCGCCAATGTCCTGCGCGGCAAGCACAAGCCGAGCTTCACCCCGCACGTCGATTGCGGTGACAATGTCATCGTCATCAATGCCGACAAGATCCGCTTCACCGGCAAGAAGCTGGCTGACAAGGTCTATTACAAGCACACCGGCTATGCCGGCGGCATCAAGGGCGTCACCGCCGGCAAGGTGCTGGAGGGCCGCTTCCCGGAGCGCGTGCTCGAGAAGGCCGTGGAGCGCATGATCCCGCGCGGCCCGCTCGGCCGTCAGCAGATGCGCAACCTGCGCATCTTCGCCGGCAGCGAGCATCCGCATGCCGCGCAGAACCCCGAGCCGCTCGACATCGCGGCGATGAACCGCAAGAACAAGGTGGGCGCATAA
PROTEIN sequence
Length: 160
MKALMKTTKSAKPHEVEKKWHIVDADGLVVGRAAVVIANVLRGKHKPSFTPHVDCGDNVIVINADKIRFTGKKLADKVYYKHTGYAGGIKGVTAGKVLEGRFPERVLEKAVERMIPRGPLGRQQMRNLRIFAGSEHPHAAQNPEPLDIAAMNRKNKVGA*