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SCNpilot_cont_300_bf_scaffold_2266_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2266_curated_1
unknown

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comp(3..98)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2266_curated_2
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(151..627)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVV9_9SPHN
DNA, contig: SP612 {ECO:0000313|EMBL:GAN12729.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2266_curated_3

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comp(676..1056)
DNA (381bp) protein (127aa)
MerC mercury resistance protein n=1 Tax=uncultured organism RepID=T1WBT3_9ZZZZ
MerC mercury resistance protein {ECO:0000313|EMBL:AGU11575.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2266_curated_4

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1155..2183
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037DDDCF
Cytochrome oxidase assembly protein {ECO:0000313|EMBL:AGU11014.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Heme A synthase
SCNpilot_cont_300_bf_scaffold_2266_curated_5
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2180..2494
DNA (315bp) protein (105aa)
Uncharacterized protein involved in tolerance to divalent cations n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QH36_AZOSU
hypothetical protein; K03926 periplasmic divalent cation tolerance protein
Uncharacterized protein involved in tolerance to divalent cations {ECO:0000313|EMBL:AEV25128.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
SCNpilot_cont_300_bf_scaffold_2266_curated_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2617..3096
DNA (480bp) protein (160aa)
50S ribosomal protein L13 n=1 Tax=Sphingomonas elodea RepID=UPI0002631A33
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
rplM; 50S ribosomal protein L13
SCNpilot_cont_300_bf_scaffold_2266_curated_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3096..3644
DNA (549bp) protein (183aa)
30S ribosomal protein S9 n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000378C485
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
rpsI; 30S ribosomal protein S9
SCNpilot_cont_300_bf_scaffold_2266_curated_8
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3742..4344)
DNA (603bp) protein (201aa)
ABC transporter-like protein; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29]
molybdate ABC transporter ATP-binding protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4D6AB
ABC transporter related protein {ECO:0000313|EMBL:ABD24662.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_cont_300_bf_scaffold_2266_curated_9
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4334..5020)
DNA (687bp) protein (229aa)
Molybdate ABC transporter, permease protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVU9_9SPHN
ModB protein {ECO:0000313|EMBL:GAN12719.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
molybdate ABC transporter permease; K02018 molybdate transport system permease protein
SCNpilot_cont_300_bf_scaffold_2266_curated_10
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5020..5808)
DNA (789bp) protein (263aa)
Molybdate ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVU8_9SPHN
Molybdate ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAM01397.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
molybdenum ABC transporter periplasmic molybdate-binding protein; K02020 molybdate transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_2266_curated_11
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5808..7604)
DNA (1797bp) protein (599aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
elongation factor 4 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B60773
GTP-binding protein LepA
SCNpilot_cont_300_bf_scaffold_2266_curated_12
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7750..8718
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630566
Protein involved in formation of curli polymers {ECO:0000313|EMBL:EJL34460.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2266_curated_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8764..9285)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000377876D
N-acetylglucosamine-6-phosphate isomerase {ECO:0000313|EMBL:AIT06015.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2266_curated_14
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9282..9860)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037B1B4C
Nicotinamide mononucleotide transporter {ECO:0000313|EMBL:AIT06016.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
putative transporter; K03811 nicotinamide mononucleotide transporter
SCNpilot_cont_300_bf_scaffold_2266_curated_15
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9938..11233
DNA (1296bp) protein (432aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2]
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289C988
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AJP72148.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
Displaying 15 items

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