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SCNpilot_cont_300_bf_scaffold_355_curated_38

Organism: scnpilot_dereplicated_Sphingomonas_1

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(35845..36219)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SKU4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 124.0
  • Bit_score: 190
  • Evalue 1.40e-45
rplU; 50S ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 124.0
  • Bit_score: 190
  • Evalue 4.40e-46
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 122.0
  • Bit_score: 190
  • Evalue 2.00e-45

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Taxonomy

Sphingomonas changbaiensis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGTTCGCAATCGTGCGCACGGGCGGCAAGCAGTATCGCGTCGCCGCCGGAGACAAGATCGTCGTCGAGAAGATCGAGGGTGACGCAGGTTCCTCGGTGACGCTTGGCGACGTGCTGCTCGCGGGCGAGGGTTCGGAGCTGAAGCCGACCGCCGGCCTCACCGTCGCCGCCGAGATCATCGCGCAGGCGAAGGGCGAGAAGGTCATCGTCTTCAAGAAGCGCCGCCGTCACAACTATCGCCGCCGCAACGGCCACCGCCAGCAGCACACGATCCTGAAGATCGTGTCGATCGGCGCGGCCGAGAAGAAGAAGGCCGCCCCGAAGGCCGCCGCCAAGCAGGCCGAGGGCGACGCCGCCCAGGCCGCCGAAGCGTAA
PROTEIN sequence
Length: 125
MFAIVRTGGKQYRVAAGDKIVVEKIEGDAGSSVTLGDVLLAGEGSELKPTAGLTVAAEIIAQAKGEKVIVFKKRRRHNYRRRNGHRQQHTILKIVSIGAAEKKKAAPKAAAKQAEGDAAQAAEA*