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SCNpilot_cont_300_bf_scaffold_355_curated_88

Organism: scnpilot_dereplicated_Sphingomonas_1

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 85023..85982

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 311.0
  • Bit_score: 451
  • Evalue 1.20e-123
mraW; S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 313.0
  • Bit_score: 429
  • Evalue 1.10e-117
16S rRNA methyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5B17A similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 307.0
  • Bit_score: 443
  • Evalue 1.40e-121

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
GTGACCGCGCAGGCTGATCCCCATATCCCGGTGCTGCTCGACGAAGTGCTCGCCGCGCTTACCCCCAGGCGCGGCGAGACCGTGGTCGACGGCACGTTCGGCGCCGGCGGCTATACGCGCGCGCTGCTGGCGACGGGCGCGCGCGTCATCGCCTTCGACCGCGATCCCGATGCGATCGCCGCCGGACGGGCGCTGGAGGCGTCGAACCCGGACCTCATCCTCGTGCCGGCCGAATTTTCCGCCATGGCCGGCGAGCTTGAGGCGCGCCGCGAGGCGCCGGTCGACGGGGTGGTGCTGGACATCGGCGTGTCGTCGATGCAGCTCGACCAGCCGGCGCGCGGCTTCTCCTTCCAGGGGGACGGGCCGCTCGACATGCGCATGTCGCAGGCGGGGCCGTCGGCCGCCGATTTCCTCAACACCGCCGACGAGGCGCTGATCGCCGACGTGCTGTGGCGCTACGGCGAGGAGCCGCGCTCGCGCCGCGTGGCCAAGGCGATCGTCGCGGCGCGGCCGCTCACCACCACCGGGCAGCTCGCGCAGGTCGTGCGCCGCGCGCTGGGGCATCGGCCGCACGACAAGAAGGACCCGGCGACGCGCGCCTTCCAGGCGATCCGCATCCATGTGAACCGCGAGCTGGAGGAGCTGGCGCAGGGCCTGGCCGCCGCCGAACGCGTGCTGGCGCCGGGCGGCCGGCTCGCGGTCGTCACCTTTCACAGCCTGGAGGACCGGCTGGTGAAACGGTTCCTGCGCGAGCGCAGCGGGGCGATGCCGGCCGGGTCGCGGCATCGTCCCGAAGCGCGCGAGGCGCGGGCGCCGAGTTTCGAGCCGGCGGCGAAGGCGGTGCGCCCGAGCGCGGCTGAAGTGGCGCGCAACCCCAGGGCGCGCTCGGCGACGCTGCGCGTGGCGCGGCGCACCGGGGCGGCGGCCTGGGCGGGCAGCGTCGAGTTAGTGGAGGCGTAA
PROTEIN sequence
Length: 320
VTAQADPHIPVLLDEVLAALTPRRGETVVDGTFGAGGYTRALLATGARVIAFDRDPDAIAAGRALEASNPDLILVPAEFSAMAGELEARREAPVDGVVLDIGVSSMQLDQPARGFSFQGDGPLDMRMSQAGPSAADFLNTADEALIADVLWRYGEEPRSRRVAKAIVAARPLTTTGQLAQVVRRALGHRPHDKKDPATRAFQAIRIHVNRELEELAQGLAAAERVLAPGGRLAVVTFHSLEDRLVKRFLRERSGAMPAGSRHRPEAREARAPSFEPAAKAVRPSAAEVARNPRARSATLRVARRTGAAAWAGSVELVEA*