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SCNpilot_cont_300_bf_scaffold_489_curated_33

Organism: scnpilot_dereplicated_Sphingomonas_1

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 24241..26535

Top 3 Functional Annotations

Value Algorithm Source
type IV secretory protein VirD4 n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C5AE similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 770.0
  • Bit_score: 1148
  • Evalue 0.0
IncW plasmid conjugative protein TrwB (TraD-like protein) {ECO:0000313|EMBL:KEQ54790.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 774.0
  • Bit_score: 1140
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 776.0
  • Bit_score: 1123
  • Evalue 0.0

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Taxonomy

Sphingobium chlorophenolicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2295
ATGGCGCGCGCTGACATCCGCTCGGACGGGCGGCCAATCCCGCTCAAGCACCATTCGGCACGCGGCAAGGTCCAGCGCAACTCGGGCAATTTCACCCGCGGTTCGCAGCTCCTCACCCACGAGGTGCTGATGTGGTTCGCCGGCGCGAAGCTGCCGGTCATCGTCTGGTTTTTCTGCTTCCTGATCGCCTATTCGGTAATCCTCTCGATCATGCTCGACGAGCACGAGATCCAGCTCATCGGCATGCGGCTCTATGCGATGCTCTGGAACTGGATCGGCGCGAACCCGATGAAGCCGGTCAACCTGACGCTCCCCGACGGCCACATCCGCCCGACCGTGATGGCGGTGGTCGAGCATATTCCCCAGGTCATCACCGCCTCGGGCAAGGCGATCCGCGGCCTCATCGGCTCGTTCTTCGTGTCGTTGTTTGCGACGATCCCGCTGTCGATCTGGTTCGTCGACCTGTCGCGGCGGCGGGGCCGGACGATCCTTCAGGAACGCCACGAGCGCGGCGCGATGCTGGTCGAACGCGACGTGCTCGCCGGCGAGATCGCGCGCCACAACCGGGCCTGTTTCGAAGCCGATGCGCGGACGCATTATCCCGATCTGACTCCGGCCGAAGTAGTGCGGCTGCCGTTCGCGGCGCGCAAGGCGGCGGGAATCCATCACCCGTACAGCCTGGCCGGCATCGCCTATCCCTACCGGCTCGAGCAGAGCCATACGATGATCATCGGCACGACCGGCGCGGGCAAGACGACCGAGCTGCGGCGGCTGGTGACGCAGCTGCGCGAACGGCAGGACACCGCGGTCGTCTTCGACCTGACCGGCGCCTATGTCGAAAGCTTCTACGACCCCGCGCACGACACCATACTCAACCCAATGGACCAGCGCTGTCCGGCCTGGTCGATCTTCGCCGATTGCACGACGCATAGCGAGTTCACGGCCGCGGCGGCGGCGCTGATCCCGGCCGACGGCGGCTCGTCCGAACCCTTCTGGGCGCTTGCCGCGCGCACGCTGTTCATCGAGATGTGCGTAAAGCTGCAGGAGGGCGGCGCGACGACCAATCTGGCGCTGTCCGAGAACCTGATGACCGCCGATTTGAAGCGCGTGCATCGCTTCCTCGCGAACACCATTGCCGACCCGCTGACCGCGCCGGAAGCCGCGCGCATGGCGGAGTCGATCCGGGCGGTGTTCAACACCAATGCACAGGTGCTTCGCTTCCTGCCCGACGAGGGGCCGCGCTTCTCGATCCGCGACTGGATCACCGGCGACAAGCAGCCCGGCAGCATCCTGTTCGTCACCTCCAACTATGTCGATCTGCCGATGAACCGGGCGCTGCTGACGCTGTGGATGGACCTTGCGATCAACCGGTTGATGACGCTGCCGCGCACCCGCTCATTGCGAACGTGGTTCCTGTTCGACGAGCTGGGCGCGCTGCACCGCCTGCCGGCGATCGAGAACGGACTCCAGACCGCGCGTTCGTTCGGCGGCGCAATGGTGCTGGGACTGCATAGCTTCGAGAAACTGATCGAGGTCTATGGCGAGCAGGGCGCACGCAACCTCGCCAGCCTCGCCCGCACCAAGCTCATTCTCGCGACCGCCGATCTCGACACCGCCGAGCAGTGTGCCCGCTACATCGGCAACCGCGAAGTCCGCCAGATGGATGAGGCTTACAGCTACGGGTATAACAACACCCGCGACGCCTCGACGCTGACCCCGCGCAAGCAGGTCGAGCCGCTCGTCATTGCCGACGACATCACCAACCTGCCGTCGATGTACGGGTTCGTAAAATTCCCCGATGGGTTCCCGGCCGCCCGGATCAAGCTCGTCTGGCGCGATTACCCGAGCATCGCTGAGGGCTTCATCGCGCGACCCGATCCGAAGCCCGTCCGTTCGAAGCGCGGCGCGGCGGCCTTCGCGGAAGGTGAGGGGGAGCAGGGTGGCCGGGACGGGTCGGGCCAGGTGGTGCATGAGGCGGGGGAGGCGCTCGACGCCGCCCGCGCGCTGGCGGCATCGATCCTGAGCGCGCCGACCGAGGACGAGCTCGCCGCGCGCGCGCAGGATGGGGAGCGGACGGATGCAATCGTGCCGGTCGATGCCGACGCGCATCGCCGCGCCGGCGAGCCGGCAAAACCGCGTGAGCCCGACGACCCGCGCGGCGCCGATGCAGCCGCGCGCCGTTCCGGTCGCGATGCGCCGCGCAGCACGGCTGTCGAGGATCTGACGCTCGTCGAGCTGCGCCAGGATTTCAGCGAGCCGGACGCCGGGCATGACGGCCCGGACATGGGCATCTGA
PROTEIN sequence
Length: 765
MARADIRSDGRPIPLKHHSARGKVQRNSGNFTRGSQLLTHEVLMWFAGAKLPVIVWFFCFLIAYSVILSIMLDEHEIQLIGMRLYAMLWNWIGANPMKPVNLTLPDGHIRPTVMAVVEHIPQVITASGKAIRGLIGSFFVSLFATIPLSIWFVDLSRRRGRTILQERHERGAMLVERDVLAGEIARHNRACFEADARTHYPDLTPAEVVRLPFAARKAAGIHHPYSLAGIAYPYRLEQSHTMIIGTTGAGKTTELRRLVTQLRERQDTAVVFDLTGAYVESFYDPAHDTILNPMDQRCPAWSIFADCTTHSEFTAAAAALIPADGGSSEPFWALAARTLFIEMCVKLQEGGATTNLALSENLMTADLKRVHRFLANTIADPLTAPEAARMAESIRAVFNTNAQVLRFLPDEGPRFSIRDWITGDKQPGSILFVTSNYVDLPMNRALLTLWMDLAINRLMTLPRTRSLRTWFLFDELGALHRLPAIENGLQTARSFGGAMVLGLHSFEKLIEVYGEQGARNLASLARTKLILATADLDTAEQCARYIGNREVRQMDEAYSYGYNNTRDASTLTPRKQVEPLVIADDITNLPSMYGFVKFPDGFPAARIKLVWRDYPSIAEGFIARPDPKPVRSKRGAAAFAEGEGEQGGRDGSGQVVHEAGEALDAARALAASILSAPTEDELAARAQDGERTDAIVPVDADAHRRAGEPAKPREPDDPRGADAAARRSGRDAPRSTAVEDLTLVELRQDFSEPDAGHDGPDMGI*