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SCNpilot_cont_300_bf_scaffold_162_curated_31

Organism: scnpilot_dereplicated_Sphingomonas_1

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(25053..26330)

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 431.0
  • Bit_score: 457
  • Evalue 2.30e-125
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 429.0
  • Bit_score: 403
  • Evalue 1.10e-109
tRNA modification GTPase MnmE n=1 Tax=Sphingomonas sp. S17 RepID=F3WYA0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 431.0
  • Bit_score: 457
  • Evalue 1.60e-125

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
ATGGACACGATCTTCGCCGTTTCGAGCGGCCAGCCACCCGCCGCGATCGCGGTATTGCGGGTGAGCGGCCCTCGCGCGCGCGGCGCGGTCGAGGCGCTCGCGGGGGCGCTTCCCGAGCCGCGCCGCGCGGTACTGCGCCGGCTGCGCGATGCTGACGGCGCCTTGCTCGACGACGCCTTGCTATTGTGGTTCCCCGGTCCGAACAGCGCGACCGGCGAGGATCTCGCCGAGTTCCATCTGCATGGCGGCATCGCGACGGTGGCGGCGGTGGAACAGACACTCGCGACGCAACCCGGCCTGCGCCGCGCGCGCGGGGGCGAGTTCACCCGGCGCGCGCTGGAGAACGGGCGGATCGATCTCGCGCAAGCGCAAGGGCTGGCAGATCTGCTCGAGGCCGAAACCGAGGCGCAGCGCCGCGCGGCGATCGCCAGCGTCGACGGCGAGGTCAGCCGCGCCGTCGCGCGCTGGCTCGCGACGTTGGCCGGGATCGCCGCGCGCATCGAGGCGATGATCGACTTCAGCGATGAGGATGATGTCGAACCGGCGGATGCGGCCGCGCTCGACGCCGCGACGCGCGCATGGCTGGACGATCTCGACGCCATCCTGGCGCGCCCGACGGTCGAGCGCTTGCGCGAGGGATGCCGGATCGTTCTCGCCGGATCACCCAACGCCGGTAAGTCATCTCTTTTCAACGCGATGATCGAGCGCGACGCCGCGATCGTGACGCCGATCGCCGGCACGACACGCGACCTGCTCGAAACGCGCGTCGTGCGGAACGGACACCTCTTCACGCTGGTTGATACCGCCGGCCTCGCCAGCGACACCGACGATCCGGTCGAGCGGATCGGCATCGAACGTGCGCGGCGGGCGGCCGATACCGCCGACATCGTGTTATGGCTCGACGATGGAGTGCCGCCCGTCGAATGGCCGGTGCTGGCGCTGCATTCGCGTTGCGATATCGCGGAACGGCTCACCGCACCCAACGGCCGCCTGCCGGTATCTCGTGATGATCTGCACAGCATCGACCTTTTGTGGGAAGCCATCGAGCAACGCGCTGCGCCGCTTTTGGCAAGTGACGGGGCCGCGCTGCGCGAACAGCAACGCAGCGCCGTCATCGCCGCCCGCGCATTCGTGGCAATAGACGGAATGGCTGACGACCTGTTAGTGCGCGCCGAGGGAGTGCGCTATGCGATGCAACAATTAGCGGGCATCGTCGGCGCGGATGCGACCGAGACGATGCTCGACGCGCTGTTCGCGCGTTTCTGCATCGGGAAGTGA
PROTEIN sequence
Length: 426
MDTIFAVSSGQPPAAIAVLRVSGPRARGAVEALAGALPEPRRAVLRRLRDADGALLDDALLLWFPGPNSATGEDLAEFHLHGGIATVAAVEQTLATQPGLRRARGGEFTRRALENGRIDLAQAQGLADLLEAETEAQRRAAIASVDGEVSRAVARWLATLAGIAARIEAMIDFSDEDDVEPADAAALDAATRAWLDDLDAILARPTVERLREGCRIVLAGSPNAGKSSLFNAMIERDAAIVTPIAGTTRDLLETRVVRNGHLFTLVDTAGLASDTDDPVERIGIERARRAADTADIVLWLDDGVPPVEWPVLALHSRCDIAERLTAPNGRLPVSRDDLHSIDLLWEAIEQRAAPLLASDGAALREQQRSAVIAARAFVAIDGMADDLLVRAEGVRYAMQQLAGIVGADATETMLDALFARFCIGK*