ggKbase home page

SCNpilot_cont_300_bf_scaffold_138_curated_13

Organism: scnpilot_dereplicated_Sphingomonas_1

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(13447..14211)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C004 similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 254.0
  • Bit_score: 438
  • Evalue 4.60e-120
AraC family transcriptional regulator {ECO:0000313|EMBL:KEZ18698.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 254.0
  • Bit_score: 435
  • Evalue 5.50e-119
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 246.0
  • Bit_score: 400
  • Evalue 3.40e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGCCATATCGCAGCGCCGCCGAGCATGAGGACGTGCCGCGCCCGGTGGTCGGCATCGGCAACGATTATCCGCCCTCGTTCGAGCTGGCCGAGCATCGCCACCGGCGCGGGCAACTCCTCTATGCCGCGAACGGCGTGGTCGCGGTCAGCACGCCGCAGGGCGCGTGGGTCGCCCCGCCCGAGCGCGCGGTGTGGATACCCGGCGGCACGCCACATGCCGTGCGCATGGTCGGCGCGGTGCAGACGCGCAGCGTGCTGATCGAGCCGAGCGCCTGCCCGGCGCTGGGCGGCGCGTGCCGCGTCGTCGCGGTGTCGCCGCTGCTGCGCCAGCTCCTGCTGGCGGCGGCGGAGATCCCGGTGGAATATGACGAGGGCGGGCGCGACGGGCTGGTGATGCGGCTGCTGGTGGTGGAGATCGAGCGCGCGCCGGTGATCCCCATCGCGGTGCCCTTCCCGCGCCACGCCGCGCTCGCCGCGCGCTGCCACGCCTTCCTCGAACGGCCGCGCGCGACCGCGACGATCGACCAATGGGCCGATGCGCTGGCGATGAACCGCCGGCGCTTCACCCGCCTGTTCCGGCGCGAGACCGGGATGAGCTTCGCGGAGTGGCGGCAGCAGGCGTGCCTGTCGGTCGCGCTGCCCCGGCTCGCGGCGGGCGAGCCGATCACCACCATCGCGCTCAATCTCGGCTATGACGGGCCGGCGAGCTTCTCCACCATGTTCAAGCGCGCCCTGGGCGTGCCGCCAAGCCGCTACCGGCCCTGA
PROTEIN sequence
Length: 255
MPYRSAAEHEDVPRPVVGIGNDYPPSFELAEHRHRRGQLLYAANGVVAVSTPQGAWVAPPERAVWIPGGTPHAVRMVGAVQTRSVLIEPSACPALGGACRVVAVSPLLRQLLLAAAEIPVEYDEGGRDGLVMRLLVVEIERAPVIPIAVPFPRHAALAARCHAFLERPRATATIDQWADALAMNRRRFTRLFRRETGMSFAEWRQQACLSVALPRLAAGEPITTIALNLGYDGPASFSTMFKRALGVPPSRYRP*