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SCNpilot_expt_500_bf_scaffold_1486_curated_3

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: comp(914..2170)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 418.0
  • Bit_score: 812
  • Evalue 2.70e-232
Transcription termination factor Rho n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WG63_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 418.0
  • Bit_score: 812
  • Evalue 1.90e-232
rho; transcription termination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 418.0
  • Bit_score: 798
  • Evalue 1.20e-228

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGCATCTTAAAGAACTCAAGACAAAATCGCCCGCGCAGCTCGTCGAAATGGCTGAAGAGCTGGGCGTCGAGGGCGCCTCGACGCTGCGCAAGCAGGATCTGATGTTCTCGATCCTCAAGGAACTCGCCGAAGAGGGCGAGGAAATCATCGGATCGGGAACGATCGAGGTTCTGCCCGACAGCTTCGGTTTTCTGCGCAGTCCCGAAGCGAATTATCTTGCCGGTCCCGACGACATCTATGTGTCGCCCAACCAGGTCCGCAAATATGGTCTGCGCACCGGCGACACCGTCGAGGGCGAGATTCGCGCGCCGAAGGACGGCGAACGCTATTTCGCGCTGACCAAGCTGATCAGCGTCAATTTCGACAATCCCGAGGTCGTGCGCCACCGCGTCAATTTCGACAATCTGACGCCGCTCTATCCGAACCAGAAGCTCAAGCTCGACACGATCGACCCGACCGTCAAGGACAAGTCGGCGCGCGTCATCGATCTCGTCAGCCCGCAGGGCAAGGGCCAGCGTGCGCTGATCGTCGCGCCGCCGCGCACCGGTAAGACGGTGCTGCTGCAGAATATCGCCAAGGCGATCACCGACAATCACCCCGAGGTCTATCTGATCGTCCTGCTGATCGACGAGCGGCCCGAGGAAGTCACCGACATGCAGCGCAGCGTCAATGGCGAGGTCGTCTCCTCGACCTTCGACGAGCCCGCGACGCGCCACGTCCAGGTCGCCGAAATGGTGATCGAAAAGGCGAAGCGGTTGGTCGAGCACAAAAAGGATGTCGTCATCCTGCTCGACTCGATCACCCGCCTCGGCCGCGCGTACAACACCGTAGTGCCGAGCTCGGGCAAGGTGCTGACCGGCGGCGTCGATGCGAATGCACTTCAGCGTCCCAAGCGCTTCTTCGGTGCCGCGCGCAATATCGAGGAAGGCGGATCGCTGTCGATCATCGCGACCGCGCTGATCGATACCGGCAGCCGCATGGACGAAGTCATCTTCGAAGAATTTAAGGGCACGGGTAACAGCGAAATCGTCCTCGACCGCAAGGTCGCCGACAAGCGCATTTTCCCATCGCTCGACGTCGGCAAGTCGGGCACCCGCAAGGAAGAACTGCTCGTCGAGAAGGACAAGCTCAGCAAGATGTGGGTGCTGCGGCGCATCCTCATGCAAATGGGCACGGTCGATGCGATGGAATTCCTGCTCGACAAGATCAAGGATTCCAAGACCAACGAAGATTTCTTCGACAGCATGAACCAGTAA
PROTEIN sequence
Length: 419
MHLKELKTKSPAQLVEMAEELGVEGASTLRKQDLMFSILKELAEEGEEIIGSGTIEVLPDSFGFLRSPEANYLAGPDDIYVSPNQVRKYGLRTGDTVEGEIRAPKDGERYFALTKLISVNFDNPEVVRHRVNFDNLTPLYPNQKLKLDTIDPTVKDKSARVIDLVSPQGKGQRALIVAPPRTGKTVLLQNIAKAITDNHPEVYLIVLLIDERPEEVTDMQRSVNGEVVSSTFDEPATRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPSLDVGKSGTRKEELLVEKDKLSKMWVLRRILMQMGTVDAMEFLLDKIKDSKTNEDFFDSMNQ*