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SCNpilot_expt_500_bf_scaffold_1486_curated_11

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 7809..8384

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVY4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 384
  • Evalue 4.60e-104
Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:ENY82444.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 384
  • Evalue 6.40e-104
sigma 54 modulation protein/ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 191.0
  • Bit_score: 345
  • Evalue 9.70e-93

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGGAAATCCGCGTCTCTGGCCACCAGATCGAAACCGGCGAAGCGCTGCAGGCGCATGTGTCGGACCGGATGAACGCGATTGCCGACAAATATTTCTCGCGCGCGATCGGGGCGCACGCGACCTTCGGAAAGGGGCCGCACGACAGTTTCCAGTGCGACATCGTCGCGCATGTCATGCAGGGTCTGGTCCTGAAAGGCCATGGCCAGGCGCAGGACGCGCATGTCGCGTTTGAGGGCGCGGCCGACCGTATCGAAAAGCAGCTGCGCCGCTATATGCGCCGGCTGAAGGACCGCAACAACGGCAATGGTGCGCAGTTGGTGACGATCGAGACGATCGAGGACAACGCCAGCTACGTCGTTTTCGACGGCGGCACCGATGATGAAGATGCGGGCGATGCGCCGGCGATCATCGCCGAAACCCGCGTCGATATCCCGACGAGCAGCGTGTCCGATGCGGTCATGATGCTGGATTTGCGTGACACCAATGCGCTGCTGTTCGTCAACAGCAAGACCGGGTCGCACAACATGGTCTATCGTCGCCGCGACGGCACGATCGGGTGGGTCGAGCCGCGCTAG
PROTEIN sequence
Length: 192
MEIRVSGHQIETGEALQAHVSDRMNAIADKYFSRAIGAHATFGKGPHDSFQCDIVAHVMQGLVLKGHGQAQDAHVAFEGAADRIEKQLRRYMRRLKDRNNGNGAQLVTIETIEDNASYVVFDGGTDDEDAGDAPAIIAETRVDIPTSSVSDAVMMLDLRDTNALLFVNSKTGSHNMVYRRRDGTIGWVEPR*