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SCNpilot_expt_500_bf_scaffold_1978_curated_12

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 13754..15076

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXA4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 440.0
  • Bit_score: 821
  • Evalue 4.40e-235
Two component, sigma54 specific, transcriptional regulator, Fis family protein {ECO:0000313|EMBL:ENY82884.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 440.0
  • Bit_score: 821
  • Evalue 6.20e-235
C4-dicarboxylate transport transcriptional regulatory protein similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 442.0
  • Bit_score: 331
  • Evalue 4.40e-88

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
ATGACCGGCGTGCGGCCCACGGTCCTTTTCGTCGAAGATGACGAGACGTTGCGCGAGGCGACGGTGCAGGCGCTGATGCTCGAAGGTTTCGAGGTTTCGGCCCACCCCGACGCCCAATCCGCGCTGCGCGGCGTCACGCCCGACTTCGCCGGCGTGATCGTCAGCGATATCCGTATGCCCGGAATGGACGGGATCGCCTTCTTCGATCATCTGCGCGCGCTCGATCCCGAAATGCAGGTGATTTTCACCACCGCGCACGGCGATGTCGCGATGGCCGTCGAGGCGATGAAGAATGGTGCGGCGGATTTTTTTACCAAGCCCTATTCGGTCTCGCGGCTGGTGCATGCAATCGGCCGGGCCCACGACCGGCGCGCGCTGGTGCTCGAAAATCGGCGCCTGCGCGACGCGCTGCGCGAGCGGGAGCATCGGCGGATCGGCGGATCGTCGCAGGTCGCCGAGCGACTGCAGCGCCTGATCGCCGAAGTCGCGCGTGCCGATGTCGACCTGATGATCTCCGGGCCGACGGGCGTGGGCAAGAATTTCGTCGCGCGGCTCGTCCACGACCTCAGCCCGCGGCGCGACAGGCCGTTCGTGACCGTCGATGCCGGCGTTCTGACGCACGACGACGCGAATCTGATCCTGTTCGGGCGCGATCCGTCGGTGGCGTTGTCGCGGTCGGGCCTCGTCGAACGCGCGCAGGGCGGCACGCTGGTCCTCGACGAGATCGAGAGCATTCCCGAGCGCGCCAAGGCCCAGTTGCTCAGCCTGATCGACACGCGCCGTTTTCTCGCGATCGGTGCCGAGCGGCCGCGTTCGGTCGACGTCCGCATCATCGCCATCTCGCGCAGCGCAGGCGAGGGAGAGGGCGCGCGGCCACTCGATCCCGCGCTGCTCCACCGGCTTGGCGGCATCGCGATCGCGCTGCCCGAACTGGCGAGCCGACGTGAGGATATTCCCGATCTCTTCCGCGAATTTGTCGCCGCCTTCGAGGCCGAACTGGAGCTTGAGACGAGCGATCTCGGCGAAGCCGAGTGGCGCCATCTGCTCAGCCACGACTGGCCGGGCAATATACGCGAGCTGCGCACCTTCGCGCGCAACTTCGTCACCGGCCTGACGCGCATCGCGCAAGGCTCACCCCGCGGCGCGGAACCGCAAAGCCTGCGCGAAATGGTCGCCCGCTTCGAACGCGCGGTGATCGAGGATGCGCTACGCGACGCAAAGGGACAGGTGGACGAGGTGCAGCAACGATTGTCCTTACCGCGCAAGACGCTCTACGACCGGCTGACGAAATATGGCCTCAGGCCCAAGGACTATCGCCGGTAA
PROTEIN sequence
Length: 441
MTGVRPTVLFVEDDETLREATVQALMLEGFEVSAHPDAQSALRGVTPDFAGVIVSDIRMPGMDGIAFFDHLRALDPEMQVIFTTAHGDVAMAVEAMKNGAADFFTKPYSVSRLVHAIGRAHDRRALVLENRRLRDALREREHRRIGGSSQVAERLQRLIAEVARADVDLMISGPTGVGKNFVARLVHDLSPRRDRPFVTVDAGVLTHDDANLILFGRDPSVALSRSGLVERAQGGTLVLDEIESIPERAKAQLLSLIDTRRFLAIGAERPRSVDVRIIAISRSAGEGEGARPLDPALLHRLGGIAIALPELASRREDIPDLFREFVAAFEAELELETSDLGEAEWRHLLSHDWPGNIRELRTFARNFVTGLTRIAQGSPRGAEPQSLREMVARFERAVIEDALRDAKGQVDEVQQRLSLPRKTLYDRLTKYGLRPKDYRR*