ggKbase home page

SCNpilot_expt_500_bf_scaffold_1978_curated_22

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 21576..22928

Top 3 Functional Annotations

Value Algorithm Source
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 450.0
  • Bit_score: 890
  • Evalue 1.10e-255
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UX92_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 450.0
  • Bit_score: 890
  • Evalue 7.90e-256
(dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 450.0
  • Bit_score: 829
  • Evalue 6.80e-238

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1353
ATGACATCCGACTCCCCCGCCAAAAATCCCGCCAAGACCTTCCACGTCAAATCCTTCGGCTGCCAGATGAACGTCTATGACGGCGAACGCATGGCGGAGATGCTGGGGACGCAGGGTTATGTTCCCGCCGCCGATGGCGCCGACGCCGATCTGGTCGTGCTCAACACCTGTCACATCCGCGAAAAGGCGGCCGAGAAGGTCTATTCGGACATCGGCCGACTGAAGCGCGAGGACGGGAGCACGCCGACGATCGCGGTCGCAGGCTGCGTCGCGCAGGCCGAGGGCGCCGAGATCGCGCGTCGCGCGCCGAGCGTCGATGTCGTCGTCGGCCCGCAGGCCTATCACCGGTTGCCCGACCTGATCGCGCGCGCCGAACGCGGCGAAAAGGCGATCGACCTCGACATGCCGCTCGAAAGCAAGTTCGGCGCGCTGCCGAAGCGCGCGGGTGGTCAGCGGCCGACGGCCTTTCTGACCGTGCAGGAAGGGTGCGACAAATTCTGTACCTATTGCGTCGTGCCCTATACGCGCGGTGCCGAGATCAGCCGGCCGTTCGCCGACCTGATCGCCGAGGCGCGCGCGCTCATCGCGGGCGGGGTGCGCGAAATCACCCTGCTCGGGCAGAATGTGAACGCGTGGGACGGCGAGGATGACAAGGGCCGGGCGATCGGCCTCGACGGCCTGATCCGCGAGCTTGCGCGGGAGGACGGGCTTGAGCGCATCCGCTATACCACCAGTCACCCCAACGACATGACCGACGGGCTGATCGCGGCGCATGGCGAGGTCGACAAGCTGATGCCCTTCCTTCACCTACCGGTGCAGGCGGGCAGCGATCGCATTCTGGCGGCGATGAACCGCAGCCATAGCGTCGACAGCTATTTGCGCGTCATCGAGCGCGTTCGCGCGGCGCGTCCCGATATTGCGATCTCGGGCGACTTCATCGTCGGCTTTCCCGGTGAGAGCGAGGCCGATTTCGAGGCGACGCTCGATATCGTGCGCGCGACCAATTACGCGATGGCGTACAGCTTCAAATATTCGCGCCGCCCTGGCACGCCCGCAGCGACGATGGACGAACAGATCGACGAAGCGGTGATGAACGACCGCCTCCAGCGGCTGCAGGCGCTGCTCAATCAGCAGCAACAGGCGTTCAATGAAGCGACGGTCGGGCGCGCGACGCGCCTGCTGCTCGAACGCAAGGGCAAGCATGACGGCCAGTTGATCGGCAAGTCACCCTGGCTGCAATCGGTGCATGTGACGGCGCCGGGGCTGGCGATCGGCGACATGGTCGATGTGCGGATTACATCGGCCGGCCCGAACAGCCTTGGCGCCGAGCCGTTGATGGAAGCGGTTGCCTAG
PROTEIN sequence
Length: 451
MTSDSPAKNPAKTFHVKSFGCQMNVYDGERMAEMLGTQGYVPAADGADADLVVLNTCHIREKAAEKVYSDIGRLKREDGSTPTIAVAGCVAQAEGAEIARRAPSVDVVVGPQAYHRLPDLIARAERGEKAIDLDMPLESKFGALPKRAGGQRPTAFLTVQEGCDKFCTYCVVPYTRGAEISRPFADLIAEARALIAGGVREITLLGQNVNAWDGEDDKGRAIGLDGLIRELAREDGLERIRYTTSHPNDMTDGLIAAHGEVDKLMPFLHLPVQAGSDRILAAMNRSHSVDSYLRVIERVRAARPDIAISGDFIVGFPGESEADFEATLDIVRATNYAMAYSFKYSRRPGTPAATMDEQIDEAVMNDRLQRLQALLNQQQQAFNEATVGRATRLLLERKGKHDGQLIGKSPWLQSVHVTAPGLAIGDMVDVRITSAGPNSLGAEPLMEAVA*