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SCNpilot_expt_500_bf_scaffold_1892_curated_3

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 1966..3045

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D650CB related cluster n=1 Tax=unknown RepID=UPI0003D650CB similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 336.0
  • Bit_score: 621
  • Evalue 4.20e-175
TraU family protein {ECO:0000313|EMBL:AJA09639.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 356.0
  • Bit_score: 641
  • Evalue 5.50e-181
TraU family protein; K12060 conjugal transfer pilus assembly protein TraU similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 334.0
  • Bit_score: 616
  • Evalue 5.50e-174

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Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGCTCGCTCGCTCCGTCCCTTTCGACGCGCCGTCCGGCACCGAGCCGCGCGGCGCGAGCGCGAAGCGGGCGAGACGGTTGAAGTTCGCCGCGCTTGCCGCCGCGCTCCTCGCCGGAATCGCGTTACCTGCAGCGCCCGTCCACGCCTCCAAATGCCCCTCGGACGCGATCTTCAACCCGATCACCAAGGTACGCTGGAACTGCATCTTCCCGATCACGATCGGCGGCGTGCGCGTCGGCAGCTATGACAAGCTCGACAAGGCGCTCGACGCCCAGTCGGCCTCCAGGCCGCTTTGCGCCTGCCGCAAGGGCGCGAGTTTCTGGTTCGGCGTGAAGGTGAGCTTCTGGACGCCCAACCGGATGATCGACGTCGTGACCGAGCCCGGCTGCATGATGGCGCTTGGGCTGGACATCATGCCGACCGGCGGGCGCCTGCAGGGCAGTCAGTCGTCGATCTCGGATGGCACCAACACGACCAAGCTGTTTGCACAGATGCATTATTACCAGGCGCCAGTCTGGAAGATGCTCGACATGCTCACGGACCTTCCTTGCCTCGAAGATGACGGGTTCGACGTTGCGCTGATGACCGAGGTTATGCCGACCTGGCAGTCGGGAACATTGGGTGCGATCATCCAGCCCGAAGGCATCCTCTTCGGTAACCCCGCGGCGGGTCTCGCTTGCATGGCAGACAGCGCGGCCGCCGCCGCCGGCAAGGTCGTCGATCCGCTCTTCTGGTGCATGGGAAGCTGGGGCTCGACCTATCCAGTCGCCGGCGACATCCACATGGGCGACCGGGTCGAGGCCTGGGCAGGGCTGGCCGCGCGCGGCACCTTCATGATGGGCCGCATGGGCGCGCTCACTATTCATTCGGCGGACGGCTGCTCGTTCAAGCCGCAGCCCATCTGGACCAAGAGCCGATACAAGCTCCAACTGATGGAGCCGGTGAAGGGCGGCAAGTGCGTCAACATCGGCCGCCCGGGCGCACTCTGGACCTCGGGCAAGCATGCGCCCGGCAAGGACAACGCCCAGTTCATGCTCTTCGAGAAAGCGATTTGCTGTGCTGGCATCTCGACGCCCTGA
PROTEIN sequence
Length: 360
MLARSVPFDAPSGTEPRGASAKRARRLKFAALAAALLAGIALPAAPVHASKCPSDAIFNPITKVRWNCIFPITIGGVRVGSYDKLDKALDAQSASRPLCACRKGASFWFGVKVSFWTPNRMIDVVTEPGCMMALGLDIMPTGGRLQGSQSSISDGTNTTKLFAQMHYYQAPVWKMLDMLTDLPCLEDDGFDVALMTEVMPTWQSGTLGAIIQPEGILFGNPAAGLACMADSAAAAAGKVVDPLFWCMGSWGSTYPVAGDIHMGDRVEAWAGLAARGTFMMGRMGALTIHSADGCSFKPQPIWTKSRYKLQLMEPVKGGKCVNIGRPGALWTSGKHAPGKDNAQFMLFEKAICCAGISTP*