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SCNpilot_expt_500_bf_scaffold_737_curated_16

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: comp(15622..16176)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W6P6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 184.0
  • Bit_score: 363
  • Evalue 1.80e-97
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:ENY83177.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 184.0
  • Bit_score: 363
  • Evalue 2.50e-97
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 184.0
  • Bit_score: 311
  • Evalue 2.00e-82

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGCTGCCGCATCTGCGCGCCTTCGGCCGCAGCCTGACCGGCAACGCCGACCTGGCCGACGATCTGGTGCAGGAGACGATGCTGAAGGCATGGAAGGCGCGCGCAAGCTATATTCCGGGGCCGTCGAGCATGAAGAGCTGGGCCTTCGTCATCCTGCGCAACTGTTTCCTGTCGCAGATGCGGCGCAAGAAATTCACCGCCGATTATGATGAGCTCGCCGCCGAACGCTTGCTCGTCGCGCCCGACGATCAGGACGACAGCCTGCACCTGTCGGACGTGCAGCGCGCGCTGATGATGCTGCCCGTCGACCAGCGCGAGGCGCTGATCCTTATCGGCGCAGGGCAATTATCCTATGAGGAAGGCGCCGACATCTGCGGCGTCGCGGTCGGCACGATGAAAAGCCGCGTCTCGCGCGCCCGGGCCGCCTTGCAGGCGATCCTCGACGGCGGCGAGATGCCGCTGCGCAGCGACGACCCGCTGCCGCCGAGCGAAGCCTTCGCGACGATCATGGGCAGCGTCGACCAACTGACAGGCGGGGGGCCATCGCCGGATTGA
PROTEIN sequence
Length: 185
MLPHLRAFGRSLTGNADLADDLVQETMLKAWKARASYIPGPSSMKSWAFVILRNCFLSQMRRKKFTADYDELAAERLLVAPDDQDDSLHLSDVQRALMMLPVDQREALILIGAGQLSYEEGADICGVAVGTMKSRVSRARAALQAILDGGEMPLRSDDPLPPSEAFATIMGSVDQLTGGGPSPD*