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SCNpilot_expt_500_bf_scaffold_1868_curated_15

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 13684..15348

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 554.0
  • Bit_score: 1100
  • Evalue 0.0
2-isopropylmalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 554.0
  • Bit_score: 1039
  • Evalue 0.0
2-isopropylmalate synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VZQ7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 554.0
  • Bit_score: 1100
  • Evalue 0.0

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1665
ATGACCATGCTCCGCGACCCTTCGGTCAAATATCGCCCCTTTCCCCAGATTCCGCTGACCGATCGCCAATGGCCCTCGCGCACGATCACGCGCGCGCCGATCTGGCTGTCGACCGATTTGCGCGACGGCAACCAGTCGCTGATCGATCCGATGGATGCCGAGAAAAAGACGCGCTTCTTCGACCTGCTCGTGCGCTGCGGGCTGAAGGAGATAGAGGTCGGCTTCCCCGCCTCGGGCGCGACCGATTTCGACTATATCCAGAACCTCGTCCGCTCGGGCCGCATCCCCGACGATGTGACGCCGCAGGTGCTGACGCAGAGCCGCGCCGACCTCATTCGCACCAGCTTCGACAGCCTGGCGGGCGCGAAAACCGCGATCGTCCACGTCTACAACGCCGTAGCGCCCGCGTGGCGCAAGATCGTCTTCGGCATGGACAAGGCCGATATCAAGGCGATCGCGGTCGAGGGTGCGAAGCAGCTGCGCGACAATGCCGCGCGCCTGCCCGACACCGACTGGCGCTTCGAATATAGCCCCGAATGTTTCTCGACGACCGAGATCGATTTCTCGATCGAGGTCTGCGCCGCGGTGATGGACATTCTCCAGCCCACCGCCGACAAGCCGATCATCCTCAACCTGCCCGCGACGGTCGAGGCGGCGACCCCCAATATCTATGCCGACCAGATCGAATATTTCGGCAAGCATCTGCCGAACCGCAACGCCGCGCTGATCAGCCTGCACACGCACAACGACCGCGGCACCGGCGTCGCCGCGGCCGAGCTCGGCCTGCTCGCCGGCGCCGACCGCGTCGAAGGCTGTCTGTTCGGCAATGGCGAACGCACCGGCAACACCTGCCTCGTCACCATCGCGCTCAACATGTATACGCAGGGCGTCGATCCCGAGCTCGATTTCTCGGACATCGATCAGGTCATCCAGACGGTCGAATATTGCAACAATATCCCCGTCCACCCGCGCCACCCCTATGGCGGCGATCTGGTCTACACCGCCTTTTCGGGCAGCCATCAGGACGCGATCAAGAAAGGCTTCGCCGCGCGCGAACGCCAGAATGACGAAGCGTGGGAGGTGCCCTATCTGCCGATCGACCCCGCCGACCTGGGGCGCAGCTACGAAGCGGTGATCCGCGTCAACAGCCAGTCGGGCAAGGGCGGCGTCGCCTGGGTGCTCGAACAGGACAAGGGACTGAAACTGCCCAAAAAGATGCAGGCCAGCTTCAGCCACGTCGTCCAGGCGCTCGCCGACGAAACGAGCCGCGAACTCGCCGCCGACGACATCTGGCAGGCGTTCGAACGCGCCTATCTCGCCACCGAAGGCAAACGCTTCCAGCTCGTCGACTGGTCCGAAAGCCATGCCGGCACCGACCGCATCTTCGCCGGCAAGCTCACGATCGACGGCACCCCGCGCAGCGTCAGCGGCCGCGGCAACGGCCTGATGTCGAGCGTCATCGCCGCGCTGGCGGAGTCCGGCGGCCCGATCATGGACATCGTCGACTATAGCGAACACGCGATCGGTCAGGGCAGCGATGTGCAGGCCGCGGCCTATGTCGAATGCCGCACCGCCGACGGGAAAAGCCTGTTCGGCTGCGGGCTGGACACCGACGTCGCGACGGCGAGCGTTCGGGCGATACTTAGCGCCGCAAATGGAGCTTAG
PROTEIN sequence
Length: 555
MTMLRDPSVKYRPFPQIPLTDRQWPSRTITRAPIWLSTDLRDGNQSLIDPMDAEKKTRFFDLLVRCGLKEIEVGFPASGATDFDYIQNLVRSGRIPDDVTPQVLTQSRADLIRTSFDSLAGAKTAIVHVYNAVAPAWRKIVFGMDKADIKAIAVEGAKQLRDNAARLPDTDWRFEYSPECFSTTEIDFSIEVCAAVMDILQPTADKPIILNLPATVEAATPNIYADQIEYFGKHLPNRNAALISLHTHNDRGTGVAAAELGLLAGADRVEGCLFGNGERTGNTCLVTIALNMYTQGVDPELDFSDIDQVIQTVEYCNNIPVHPRHPYGGDLVYTAFSGSHQDAIKKGFAARERQNDEAWEVPYLPIDPADLGRSYEAVIRVNSQSGKGGVAWVLEQDKGLKLPKKMQASFSHVVQALADETSRELAADDIWQAFERAYLATEGKRFQLVDWSESHAGTDRIFAGKLTIDGTPRSVSGRGNGLMSSVIAALAESGGPIMDIVDYSEHAIGQGSDVQAAAYVECRTADGKSLFGCGLDTDVATASVRAILSAANGA*