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SCNpilot_expt_500_bf_scaffold_1868_curated_20

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 19695..19901

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GT29_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 68.0
  • Bit_score: 132
  • Evalue 1.90e-28
Cold-shock DNA-binding protein family protein {ECO:0000313|EMBL:KGB58266.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 68.0
  • Bit_score: 138
  • Evalue 2.90e-30
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 68.0
  • Bit_score: 132
  • Evalue 6.10e-29

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGCCGATCGGCACCGTAAAATTCTTCAACGCTGACAAGGGCTATGGCTTCATCGAAAATGAAGACGGCTCGGGCGACAGCTTCGTCCATATCACCGCGGTCCAGGCCGCGGGTATGGACACGCTGAACAAGGAACAGCGCGTCTCCTACGAACTCGAAACCGGCCGCAATGGCAAGGTTTCGGCGATCAACCTCCAGTCGGCCTGA
PROTEIN sequence
Length: 69
MPIGTVKFFNADKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGRNGKVSAINLQSA*