ggKbase home page

SCNpilot_expt_500_bf_scaffold_930_curated_14

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: comp(12267..12725)

Top 3 Functional Annotations

Value Algorithm Source
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 152.0
  • Bit_score: 283
  • Evalue 2.10e-73
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 152.0
  • Bit_score: 270
  • Evalue 2.40e-70
Putative Holliday junction resolvase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UT87_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 152.0
  • Bit_score: 283
  • Evalue 1.50e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGATTACCACCGCCGCCTCCGATTTTGCCGCCGCCCTGCCCCGCGGCGGCCGCCTGATGGGCCTCGATGTCGGGACCAAGACGATCGGCGTTGCGCTGTGCGACGCGGGGTGGAGCTTCGCAACGCCCGACAAGACAATCGTCCGCAAGAAATTCACGGTCGATCTGGAGGCGCTCAAGGCGCTGGTCGCAGCGCAGTCGGTGGTCGGCATCGTCGTTGGCCTGCCGCTCAACATGGACGGCAGCGACAGCCCGCGCACCCAAAGCACCCGCGCCTTCGCCCGCAACCTCGCGCCGCTTGCGCTACCCCTGTTGCTGTGGGACGAGCGCTGGTCGACCGCCGCGGTGGAGCGCGCGATGATCGCCGCCGACGTCAGCCGCGCCAAGCGCGCCGAGCGCGTCGACAGCGCGGCCGCCGCCTTCATCCTTCAGGGCGCGATCGACGCGCTGGTGCGCTGA
PROTEIN sequence
Length: 153
MITTAASDFAAALPRGGRLMGLDVGTKTIGVALCDAGWSFATPDKTIVRKKFTVDLEALKALVAAQSVVGIVVGLPLNMDGSDSPRTQSTRAFARNLAPLALPLLLWDERWSTAAVERAMIAADVSRAKRAERVDSAAAAFILQGAIDALVR*