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SCNpilot_cont_300_bf_scaffold_101_curated

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Displaying items 151-180 of 286 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_101_curated_151
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(150618..150839)
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Cytophagaceae RepID=D2QS84_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD57772.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_101_curated_152
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

151076..151828
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00038026B5
CutC family protein; K06201 copper homeostasis protein
Copper homeostasis protein CutC {ECO:0000256|HAMAP-Rule:MF_00795}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_153
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(151802..152656)
DNA (855bp) protein (285aa)
formyltetrahydrofolate deformylase; K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10]
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
formyltetrahydrofolate deformylase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037D4095
SCNpilot_cont_300_bf_scaffold_101_curated_154
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

152737..153735
DNA (999bp) protein (333aa)
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase (EC:3.5.1.26); K01444 N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase {ECO:0000313|EMBL:ADB41663.1}; EC=3.5.1.26 {ECO:0000313|EMBL:ADB41663.1};; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
glycosylasparaginase n=1 Tax=Spirosoma panaciterrae RepID=UPI000381E078
SCNpilot_cont_300_bf_scaffold_101_curated_155
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

153822..155642
DNA (1821bp) protein (607aa)
glycogen(starch) synthase (EC:2.4.1.11); K00693 glycogen(starch) synthase [EC:2.4.1.11]
Glycogen(Starch) synthase {ECO:0000313|EMBL:ADB41662.1}; EC=2.4.1.11 {ECO:0000313|EMBL:ADB41662.1};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
glycogen synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI000372226D
SCNpilot_cont_300_bf_scaffold_101_curated_156
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

155751..156272
DNA (522bp) protein (174aa)
molybdenum cofactor synthesis protein; K03831 molybdopterin adenylyltransferase [EC:2.7.7.75]
molybdopterin adenylyltransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI000366D991
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:ADB41659.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_157
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(156950..158104)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B4DC2
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADB37001.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_158
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

158443..159000
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00036F89C1
Uncharacterized protein {ECO:0000313|EMBL:CCH51500.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_101_curated_159
unknown

Not on your lists

159755..159961
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_101_curated_160
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

160254..160922
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GFS5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH52750.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
putative transport protein; K07148 uncharacterized protein
SCNpilot_cont_300_bf_scaffold_101_curated_161
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

161219..161500
DNA (282bp) protein (94aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000360BF4A
Uncharacterized protein {ECO:0000313|EMBL:CCH52750.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
transporter; K07148 uncharacterized protein
SCNpilot_cont_300_bf_scaffold_101_curated_162
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(161591..161935)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036FCB44
Uncharacterized protein {ECO:0000313|EMBL:EOR30498.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_101_curated_163
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(162074..162550)
DNA (477bp) protein (159aa)
GCN5-like N-acetyltransferaser; K00676 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037108EE
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADZ78694.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_cont_300_bf_scaffold_101_curated_164
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(162785..163243)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035CF593
Uncharacterized protein {ECO:0000313|EMBL:ETZ24912.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_101_curated_165
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

163473..164279
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003650F7B
Uncharacterized protein {ECO:0000313|EMBL:ETZ23617.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_101_curated_166
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

164369..165253
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003668540
Prestalk A differentiation protein A {ECO:0000313|EMBL:CCH52869.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
NmrA family protein
SCNpilot_cont_300_bf_scaffold_101_curated_167
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

165319..165816
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000372F4E3
hypothetical protein
Putative integral membrane protein {ECO:0000313|EMBL:AFD08696.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_300_bf_scaffold_101_curated_168
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

165906..166457
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000381D233
dihydrofolate reductase
Dihydrofolate reductase {ECO:0000313|EMBL:AGP34681.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCNpilot_cont_300_bf_scaffold_101_curated_169
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(166478..167473)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037BBF2A
alpha/beta hydrolase
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AGA28424.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCNpilot_cont_300_bf_scaffold_101_curated_170
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(167576..168199)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GBM5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH51299.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
SCNpilot_cont_300_bf_scaffold_101_curated_171
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(168186..168704)
DNA (519bp) protein (173aa)
RfaY1 protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GBM4_9BACT
RfaY1 protein {ECO:0000313|EMBL:CCH51298.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
sigma-70 family RNA polymerase sigma factor
SCNpilot_cont_300_bf_scaffold_101_curated_172
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(168998..169675)
DNA (678bp) protein (226aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Endopeptidase Clp (EC:3.4.21.92)
ATP-dependent Clp protease ClpP n=1 Tax=Spirosoma panaciterrae RepID=UPI0003826473
SCNpilot_cont_300_bf_scaffold_101_curated_173
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(169798..170016)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000382950B
Uncharacterized protein {ECO:0000313|EMBL:CCH52454.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
SCNpilot_cont_300_bf_scaffold_101_curated_174
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(170028..170561)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003803F40
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCH52455.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
sigma-70 family RNA polymerase sigma factor
SCNpilot_cont_300_bf_scaffold_101_curated_175
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(171037..172233)
DNA (1197bp) protein (399aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037504CF
SCNpilot_cont_300_bf_scaffold_101_curated_176
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

172288..173178
DNA (891bp) protein (297aa)
ketosamine-3-kinase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003710C07
fructosamine/ketosamine-3-kinase
Fructosamine/Ketosamine-3-kinase {ECO:0000313|EMBL:ADB41657.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_177
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

173264..174691
DNA (1428bp) protein (476aa)
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
DEAD/DEAH box helicase n=1 Tax=Spirosoma panaciterrae RepID=UPI000365F678
DEAD/DEAH box helicase {ECO:0000313|EMBL:AKD57780.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_101_curated_178
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

174759..175562
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036C1C59
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ADB41655.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_179
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(175647..176702)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000364F48C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41654.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_101_curated_180
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

176861..177760
DNA (900bp) protein (300aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
NAD-dependent epimerase/dehydratase; K02377 GDP-L-fucose synthase [EC:1.1.1.271]
GDP-L-fucose synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003756DDD
Displaying items 151-180 of 286 in total

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