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SCNpilot_cont_300_bf_scaffold_223_curated

Search features with annotation key words

Displaying items 61-90 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_223_curated_61
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

72875..73648
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000363D42E
Peptidase M48 {ECO:0000313|EMBL:AKD54513.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
peptidase M48 Ste24p
SCNpilot_cont_300_bf_scaffold_223_curated_62
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

73799..74566
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003738CF7
Uncharacterized protein {ECO:0000313|EMBL:AKD55849.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_223_curated_63
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

74607..75869
DNA (1263bp) protein (421aa)
UDP-N-acetyl-D-glucosamine 6-dehydrogenase {ECO:0000313|EMBL:KHJ39105.1}; EC=1.1.1.136 {ECO:0000313|EMBL:KHJ39105.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000375BC39
nucleotide sugar dehydrogenase
SCNpilot_cont_300_bf_scaffold_223_curated_64
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(75971..76672)
DNA (702bp) protein (234aa)
Vacuolar iron transporter 1 n=1 Tax=Spirosoma panaciterrae RepID=UPI00036AC530
protein of unknown function DUF125 transmembrane
Uncharacterized protein {ECO:0000313|EMBL:CCH00892.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_223_curated_65
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(76675..77895)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036206A3
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADB39187.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_223_curated_66
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(77959..82374)
DNA (4416bp) protein (1472aa)
acriflavine resistance protein B n=1 Tax=Spirosoma panaciterrae RepID=UPI0003611899
CzcA family heavy metal efflux pump; K07239 heavy-metal exporter, HME family
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ADB39188.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_223_curated_67
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(82594..82980)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000366754F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD56191.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_223_curated_68
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(83085..83504)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003640426
Uncharacterized protein {ECO:0000313|EMBL:AKD57621.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
response regulator receiver protein
SCNpilot_cont_300_bf_scaffold_223_curated_69
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(83683..85266)
DNA (1584bp) protein (528aa)
glycoside hydrolase family protein; K01212 levanase [EC:3.2.1.65]
glycosyl hydrolase family 32 n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C934F
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:AKD56377.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_223_curated_70
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(85506..86216)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000381FEDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB38506.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_223_curated_71
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

86775..87809
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036C3375
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACT92258.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_300_bf_scaffold_223_curated_72
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

87877..89145
DNA (1269bp) protein (423aa)
mandelate racemase n=1 Tax=Spirosoma panaciterrae RepID=UPI000377CE88
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:CCH57197.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
muconate lactonizing mandelate racemase protein
SCNpilot_cont_300_bf_scaffold_223_curated_73
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

89168..90169
DNA (1002bp) protein (334aa)
2-keto-3-deoxy-galactonokinase; K00883 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000374C18F
2-keto-3-deoxy-galactonokinase {ECO:0000313|EMBL:ADB39944.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_223_curated_74
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

90166..90807
DNA (642bp) protein (214aa)
2-dehydro-3-deoxyphosphogluconate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037765E3
2-dehydro-3-deoxyphosphogluconate aldolase {ECO:0000313|EMBL:AKD54240.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_223_curated_75
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

90891..92162
DNA (1272bp) protein (424aa)
hexuranate MFS transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI00035EC78A
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADB39946.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_223_curated_76
unknown

Not on your lists

comp(92186..92728)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C93FD
SCNpilot_cont_300_bf_scaffold_223_curated_77
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(93040..94722)
DNA (1683bp) protein (561aa)
alpha-glucan phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1]
Alpha-glucan phosphorylase {ECO:0000313|EMBL:ADB39558.1}; EC=2.4.1.1 {ECO:0000313|EMBL:ADB39558.1};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E5214
SCNpilot_cont_300_bf_scaffold_223_curated_78
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94957..96123
DNA (1167bp) protein (389aa)
acetate kinase; K00925 acetate kinase [EC:2.7.2.1]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036CCAB3
Tax=CG_Delta_01
SCNpilot_cont_300_bf_scaffold_223_curated_79
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

96340..97026
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG24_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01627.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_300_bf_scaffold_223_curated_80
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

97228..98382
DNA (1155bp) protein (385aa)
Probable acyltransferase n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GXP1_FLAPJ
Contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22888.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
acyltransferase
SCNpilot_cont_300_bf_scaffold_223_curated_81
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(98598..99644)
DNA (1047bp) protein (349aa)
transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI00035F8B3A
Crp3 protein {ECO:0000313|EMBL:CCH53787.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Crp/Fnr family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_223_curated_82
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(99622..101226)
DNA (1605bp) protein (535aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000374DA3F
PAS/PAC sensor signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_223_curated_83
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

101538..101849
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E1DF8
Uncharacterized protein {ECO:0000313|EMBL:AIZ63695.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_223_curated_84
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(101838..104354)
DNA (2517bp) protein (839aa)
ATPase P (EC:3.6.3.6); K01537 Ca2+-transporting ATPase [EC:3.6.3.8]
ATPase, P-type (Transporting), HAD superfamily, subfamily IC {ECO:0000313|EMBL:ADB39563.1}; EC=3.6.3.6 {ECO:0000313|EMBL:ADB39563.1};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003767D94
SCNpilot_cont_300_bf_scaffold_223_curated_85
unknown

Not on your lists

104469..104573
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_223_curated_86
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

104570..106933
DNA (2364bp) protein (788aa)
phosphoketolase (EC:4.1.2.9)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000364CB89
Phosphoketolase {ECO:0000313|EMBL:AKD58835.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_223_curated_87
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

106980..107792
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003631FBA
UspA domain protein {ECO:0000313|EMBL:CCH52642.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
UspA domain-containing protein
SCNpilot_cont_300_bf_scaffold_223_curated_88
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

107908..108897
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000361349A
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:CCH00899.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_223_curated_89
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(108989..109429)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000374992F
Uncharacterized protein {ECO:0000313|EMBL:AKD54471.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_223_curated_90
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(109426..110442)
DNA (1017bp) protein (339aa)
Titin {ECO:0000313|EMBL:CCH52085.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CCH52085.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003689F65
TTN1; Titin
Displaying items 61-90 of 108 in total

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