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SCNpilot_cont_300_bf_scaffold_223_curated

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_223_curated_1
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2..1501
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036BFFE9
Uncharacterized protein {ECO:0000313|EMBL:AKD56883.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_223_curated_2
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1882..10551
DNA (8670bp) protein (2890aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036BFFE9
Uncharacterized protein {ECO:0000313|EMBL:AKD56883.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_223_curated_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10813..12948
DNA (2136bp) protein (712aa)
peptidase S9 n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D5361
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ADB39278.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_223_curated_4
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12977..15853
DNA (2877bp) protein (959aa)
peptidase n=1 Tax=Spirosoma panaciterrae RepID=UPI000377D25C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39277.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_223_curated_5
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15927..16334)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003766841
Glyoxalase {ECO:0000313|EMBL:KIA92168.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
glyoxalase/bleomycin resistance protein/dioxygenase; K04750 PhnB protein
SCNpilot_cont_300_bf_scaffold_223_curated_6
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16562..17140)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F9940
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ADB39275.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_223_curated_7
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17281..18264
DNA (984bp) protein (328aa)
AraC family transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI0003708E43
AraC family transcriptional regulator {ECO:0000313|EMBL:ETZ24339.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
AraC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_223_curated_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18325..19254)
DNA (930bp) protein (310aa)
inosine/uridine-preferring nucleoside hydrolase; K01239 purine nucleosidase [EC:3.2.2.1]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035DF836
Inosine/uridine-preferring nucleoside hydrolase {ECO:0000313|EMBL:ADB39273.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_223_curated_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19254..20072)
DNA (819bp) protein (273aa)
Beta-lactamase {ECO:0000313|EMBL:CCH51292.1}; EC=3.5.2.6 {ECO:0000313|EMBL:CCH51292.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
beta-lactamase (EC:3.5.2.6); K01467 beta-lactamase [EC:3.5.2.6]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000375FAF8
SCNpilot_cont_300_bf_scaffold_223_curated_10
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20086..21150)
DNA (1065bp) protein (355aa)
purine nucleoside transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI00037922B4
purine nucleoside permease
Purine nucleoside permease {ECO:0000313|EMBL:ADB39271.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_223_curated_11
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21209..23125)
DNA (1917bp) protein (639aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037EEF59
X-Pro dipeptidyl-peptidase {ECO:0000313|EMBL:AKD56428.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
peptidase S15; K06978
SCNpilot_cont_300_bf_scaffold_223_curated_12
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

23199..23624
DNA (426bp) protein (142aa)
ATP-dependent transcriptional regulator, MalT-like, LuxR family n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KXB1_HALH1
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIF32028.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
LuxR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_223_curated_13
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

23722..24255
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JHL3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIF32027.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_223_curated_14
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24335..24712
DNA (378bp) protein (126aa)
glyoxalase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003630205
Glyoxalase {ECO:0000313|EMBL:AKD55321.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_300_bf_scaffold_223_curated_15
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24719..25024)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ER36_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI52077.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_300_bf_scaffold_223_curated_16
unknown

Not on your lists

25375..25581
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_223_curated_17
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25978..28977
DNA (3000bp) protein (1000aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036964D9
Amidohydrolase {ECO:0000313|EMBL:CCH52686.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
amidohydrolase
SCNpilot_cont_300_bf_scaffold_223_curated_18
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29223..29624
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000360A7BC
Uncharacterized protein {ECO:0000313|EMBL:EJL61973.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_223_curated_19
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29686..30675)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R1K3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EPR10555.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
aminoglycoside phosphotransferase
SCNpilot_cont_300_bf_scaffold_223_curated_20
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30841..31632)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A3FD8
AraC family transcriptional regulator {ECO:0000313|EMBL:AKD55781.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
AraC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_223_curated_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31721..32608)
DNA (888bp) protein (296aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEV96679.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEV96679.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
oxidoreductase n=1 Tax=Spirosoma panaciterrae RepID=UPI000381B9BD
3-oxoacyl-(acyl-carrier-protein) reductase
SCNpilot_cont_300_bf_scaffold_223_curated_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32721..33629)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003713759
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEW00542.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_300_bf_scaffold_223_curated_23
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33691..34320)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036661FE
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein; K07006
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:ADB42184.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_223_curated_24
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34368..34934)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000378BA52
hypothetical protein; K09958 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42183.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_223_curated_25
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34959..35504)
DNA (546bp) protein (182aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003763726
alkylhydroperoxidase AhpD
SCNpilot_cont_300_bf_scaffold_223_curated_26
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35869..36966)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003632253
Putative penicillin-binding protein {ECO:0000313|EMBL:GAO45367.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
beta-lactamase
SCNpilot_cont_300_bf_scaffold_223_curated_27
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(37041..38189)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036EB8B2
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ADB39264.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_223_curated_28
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(38200..38403)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037BA430
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39263.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_223_curated_29
unknown

Not on your lists

38519..39721
DNA (1203bp) protein (401aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_223_curated_30
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(39727..41268)
DNA (1542bp) protein (514aa)
carboxypeptidase n=1 Tax=Spirosoma panaciterrae RepID=UPI000380A918
peptidase S10 serine carboxypeptidase
Peptidase S10 serine carboxypeptidase {ECO:0000313|EMBL:ADB39262.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
Displaying items 1-30 of 108 in total

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