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SCNpilot_cont_300_bf_scaffold_992_curated

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_992_curated_1
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(188..1054)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E7823
hypothetical protein
Molybdopterin-guanine dinucleotide biosynthesis protein MobB {ECO:0000313|EMBL:KIA96224.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
SCNpilot_cont_300_bf_scaffold_992_curated_2
unknown

Not on your lists

comp(1074..1187)
DNA (114bp) protein (38aa)
hypothetical protein, partial n=1 Tax=Spirosoma panaciterrae RepID=UPI00036AE743
SCNpilot_cont_300_bf_scaffold_992_curated_3
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

1294..1992
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI0003620E9C
plasmid pRiA4b ORF-3 family protein
Plasmid pRiA4b ORF-3 family protein {ECO:0000313|EMBL:ABX07816.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_cont_300_bf_scaffold_992_curated_4
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2058..2579
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000364F695
Uncharacterized protein {ECO:0000313|EMBL:KFF22358.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
Site-specific recombinases, DNA invertase Pin homologs
SCNpilot_cont_300_bf_scaffold_992_curated_5
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2650..4047
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002484CD4
Uncharacterized protein {ECO:0000313|EMBL:KFF22357.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_992_curated_6
unknown

Not on your lists

4071..4211
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_992_curated_7
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4266..4538)
DNA (273bp) protein (91aa)
Plasmid maintenance system antidote protein, XRE family n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QQL9_SPILD
XRE family transcriptional regulator
Plasmid maintenance system antidote protein, XRE family {ECO:0000313|EMBL:ADB40800.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_992_curated_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4553..5053)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QQL8_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB40799.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_992_curated_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5234..5686
DNA (453bp) protein (151aa)
Resolvase, N-terminal n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GU10_9BACT
Resolvase, N-terminal {ECO:0000313|EMBL:CCH57611.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Resolvase domain-containing protein
SCNpilot_cont_300_bf_scaffold_992_curated_10
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5876..6148
DNA (273bp) protein (91aa)
Transposase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GLQ8_9BACT
Transposase {ECO:0000313|EMBL:CCH54834.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
transposase IS3/IS911 family protein
SCNpilot_cont_300_bf_scaffold_992_curated_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6310..7035
DNA (726bp) protein (242aa)
Integrase catalytic region n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QEQ0_SPILD
integrase catalytic protein
Integrase catalytic region {ECO:0000313|EMBL:ADB38302.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_992_curated_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7061..7300
DNA (240bp) protein (80aa)
Integrase catalytic region n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QEQ0_SPILD
integrase catalytic protein
Integrase catalytic region {ECO:0000313|EMBL:ADB38302.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_992_curated_13
unknown

Not on your lists

comp(7286..7540)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_992_curated_14
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7668..8447)
DNA (780bp) protein (260aa)
Esterase/lipase-like protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KEI8_9BACT
esterase/lipase-like protein
Esterase/lipase-like protein {ECO:0000313|EMBL:CCH02541.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_992_curated_15
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8590..9564)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESY7_AMOA5
Uncharacterized protein {ECO:0000313|EMBL:KIA92495.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_992_curated_16
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9803..11350)
DNA (1548bp) protein (516aa)
long-chain-fatty-acid--CoA ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AEE52471.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AEE52471.1};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Long-chain-fatty-acid--CoA ligase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KVL4_HALH1
SCNpilot_cont_300_bf_scaffold_992_curated_17
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11493..12401)
DNA (909bp) protein (303aa)
AraC family transcriptional regulator n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KEI9_9BACT
pcrR; AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:CCH02542.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_992_curated_18
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12582..13178)
DNA (597bp) protein (199aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JWK3_9BACT
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ELR71999.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
cAMP-binding protein
SCNpilot_cont_300_bf_scaffold_992_curated_19
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13267..14223)
DNA (957bp) protein (319aa)
Nitric oxide-dependent regulator DnrN or NorA n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JT33_9BACT
Nitric oxide-dependent regulator DnrN or NorA {ECO:0000313|EMBL:ELR72005.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
iron-sulfur cluster repair di-iron protein
SCNpilot_cont_300_bf_scaffold_992_curated_20
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14505..15776)
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000370BB7E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB37870.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_992_curated_21
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15773..16225)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037AC308
BadM/Rrf2 family transcriptional regulator
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:ADB37871.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_992_curated_22
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16422..16880
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI0003639CE2
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AEI46568.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_300_bf_scaffold_992_curated_23
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17137..19125
DNA (1989bp) protein (663aa)
nitrous-oxide reductase (EC:1.7.2.4); K00376 nitrous-oxide reductase [EC:1.7.2.4]
Nitrous-oxide reductase {ECO:0000313|EMBL:AEI46569.1}; EC=1.7.2.4 {ECO:0000313|EMBL:AEI46569.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
nitrous-oxide reductase n=1 Tax=Rudanella lutea RepID=UPI000371225C
SCNpilot_cont_300_bf_scaffold_992_curated_24
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19125..20138
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000379030B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI46570.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_300_bf_scaffold_992_curated_25
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20125..21360
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036CE923
parallel beta-helix repeat-containing protein; K07218 nitrous oxidase accessory protein
Parallel beta-helix repeat protein {ECO:0000313|EMBL:AEI46571.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_300_bf_scaffold_992_curated_26
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21563..22087
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000361AD10
Copper ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC89493.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
ABC transporter
SCNpilot_cont_300_bf_scaffold_992_curated_27
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22096..22863
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000375E1BA
Putative copper ABC transporter permease protein {ECO:0000313|EMBL:GAO42688.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
nitrous-oxide metabolic protein NosY; K01992 ABC-2 type transport system permease protein
SCNpilot_cont_300_bf_scaffold_992_curated_28
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22860..23927
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QR21_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB37873.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_992_curated_29
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24085..24786)
DNA (702bp) protein (234aa)
ABC transporter ATP-binding protein n=1 Tax=Rudanella lutea RepID=UPI0003658958
Bacitracin transport ATP-binding protein bcrA {ECO:0000313|EMBL:CCH55103.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_992_curated_30
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24855..25505)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00035DEC4F
Uncharacterized protein {ECO:0000313|EMBL:CCH55102.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
Displaying items 1-30 of 33 in total

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