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SCNpilot_cont_300_bf_scaffold_228_curated

Search features with annotation key words

Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_228_curated_1
Eikenella corrodens, Eikenella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

298..756
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Eikenella corrodens CC92I RepID=V7IH50_EIKCO
Uncharacterized protein {ECO:0000313|EMBL:ETA84212.1}; TaxID=1073362 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Eikenella.;" source="Eikenella corrodens CC92I.;"
SCNpilot_cont_300_bf_scaffold_228_curated_2
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1686..2711
DNA (1026bp) protein (342aa)
Mitochondrial metalloendopeptidase OMA1 {ECO:0000313|EMBL:CCH52482.1}; EC=3.4.24.- {ECO:0000313|EMBL:CCH52482.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00037903C4
peptidase M48 Ste24p
SCNpilot_cont_300_bf_scaffold_228_curated_3
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3383..6358)
DNA (2976bp) protein (992aa)
glycosyltransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036F2F18
Glycosyltransferase {ECO:0000313|EMBL:AKD57658.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_228_curated_4
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6571..7857)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003713D7E
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_cont_300_bf_scaffold_228_curated_5
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7861..9150)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00038193D6
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_cont_300_bf_scaffold_228_curated_6
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9279..10721)
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00038019CD
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:ADZ78528.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_cont_300_bf_scaffold_228_curated_7
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10736..14089)
DNA (3354bp) protein (1118aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036C8F93
TonB-dependent receptor plug {ECO:0000313|EMBL:ADZ78527.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
TonB-dependent receptor plug
SCNpilot_cont_300_bf_scaffold_228_curated_8
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14246..15352)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036DF254
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:CCH51236.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
anti-FecI sigma factor, FecR
SCNpilot_cont_300_bf_scaffold_228_curated_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15491..16102)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000370CB0B
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCH51237.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
SCNpilot_cont_300_bf_scaffold_228_curated_10
unknown

Not on your lists

comp(16309..16476)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_228_curated_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16610..16828)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000368D587
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB38926.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_228_curated_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16936..17913)
DNA (978bp) protein (326aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:ADB38925.1}; EC=6.1.1.2 {ECO:0000313|EMBL:ADB38925.1};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
tryptophanyl-tRNA synthetase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003696DAE
SCNpilot_cont_300_bf_scaffold_228_curated_13
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18022..20289)
DNA (2268bp) protein (756aa)
Malic enzyme {ECO:0000313|EMBL:AKD58565.1}; EC=1.1.1.40 {ECO:0000313|EMBL:AKD58565.1};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
malate dehydrogenase (EC:1.1.1.40 2.3.1.8); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
malic enzyme n=1 Tax=Spirosoma panaciterrae RepID=UPI0003621932
SCNpilot_cont_300_bf_scaffold_228_curated_14
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20364..21395)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000368478D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB38923.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_228_curated_15
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21588..22004)
DNA (417bp) protein (139aa)
thioesterase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A6436
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ADB38922.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_228_curated_16
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22114..22785
DNA (672bp) protein (224aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
phosphoglycerate mutase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036C4780
Phosphoglycerate mutase {ECO:0000313|EMBL:ADB38921.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_228_curated_17
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22936..24024
DNA (1089bp) protein (363aa)
histidine kinase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037DBC8C
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ADB38920.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_228_curated_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24106..24840
DNA (735bp) protein (245aa)
transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F9071
LytTR family transcriptional regulator; K02477 two-component system, LytT family, response regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ADB38919.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_228_curated_19
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24923..25723
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003662041
Uncharacterized protein {ECO:0000313|EMBL:AKD56101.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_228_curated_20
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25865..27403
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000362EA46
Uncharacterized protein {ECO:0000313|EMBL:AKD56100.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_228_curated_21
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27400..27687
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003617A24
Uncharacterized protein {ECO:0000313|EMBL:AKD56099.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_228_curated_22
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27716..29152)
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000364D1D0
Uncharacterized protein {ECO:0000313|EMBL:CCH55442.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
type 12 methyltransferase
SCNpilot_cont_300_bf_scaffold_228_curated_23
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29293..30831
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003715F19
Uncharacterized protein {ECO:0000313|EMBL:CCH55441.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
SCNpilot_cont_300_bf_scaffold_228_curated_24
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30851..31333)
DNA (483bp) protein (161aa)
globin n=1 Tax=Spirosoma panaciterrae RepID=UPI0003708022
globin; K06886 hemoglobin
Globin {ECO:0000313|EMBL:ADB38916.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_228_curated_25
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31491..32624)
DNA (1134bp) protein (378aa)
alanine dehydrogenase (EC:1.4.1.1); K00259 alanine dehydrogenase [EC:1.4.1.1]
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
alanine dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003783CC4
SCNpilot_cont_300_bf_scaffold_228_curated_26
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32797..33258
DNA (462bp) protein (154aa)
AsnC family transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI000365AD69
AsnC family transcriptional regulator; K05800 Lrp/AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:AKD56096.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_228_curated_27
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33350..34066
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003623222
DSBA oxidoreductase {ECO:0000313|EMBL:AKD55834.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
DSBA oxidoreductase
SCNpilot_cont_300_bf_scaffold_228_curated_28
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

34265..35227
DNA (963bp) protein (321aa)
galactose oxidase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003742FC2
Kelch repeat-containing protein
Kelch repeat-containing protein {ECO:0000313|EMBL:ADB38912.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_228_curated_29
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

35258..36154
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E126E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB38911.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_228_curated_30
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

36185..37351
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003709241
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB38910.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
Displaying items 1-30 of 127 in total

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