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SCNpilot_cont_300_bf_scaffold_1364_curated

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1364_curated_1
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..1203
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J7K7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ60909.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1364_curated_2
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1312..1698)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0P154_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:CDT15341.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1364_curated_3
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2200..2730
DNA (531bp) protein (177aa)
Helix-turn-helix, AraC domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IK55_FLUTR
AraC-type helix-turn-helix domain-containing protein
Helix-turn-helix, AraC domain protein {ECO:0000313|EMBL:AEA42954.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
SCNpilot_cont_300_bf_scaffold_1364_curated_4
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2804..3664
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MFJ9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIA82565.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
DNA-binding domain-containing protein
SCNpilot_cont_300_bf_scaffold_1364_curated_5
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3765..4058
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NVF4_9SPHI
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:KIA82566.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1364_curated_6
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4523..5449)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037EBFF3
Integrase catalytic subunit {ECO:0000313|EMBL:EKF54943.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
Integrase catalytic region
SCNpilot_cont_300_bf_scaffold_1364_curated_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5446..5853)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037103E1
Uncharacterized protein {ECO:0000313|EMBL:KIC89041.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_cont_300_bf_scaffold_1364_curated_8
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6076..6939)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI0003744AE4
UspA domain protein {ECO:0000313|EMBL:CCH52682.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
UspA domain-containing protein
SCNpilot_cont_300_bf_scaffold_1364_curated_9
unknown

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comp(7067..7246)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1364_curated_10
unknown

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comp(7395..7649)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1364_curated_11
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7717..8130)
DNA (414bp) protein (138aa)
Transcription elongation factor n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11P04_CYTH3
greA; transcription elongation factor; K06140 regulator of nucleoside diphosphate kinase
Tax=GWB2_Bacteroidetes_41_8_curated
SCNpilot_cont_300_bf_scaffold_1364_curated_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8215..8898)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036AA1C2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96395.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_300_bf_scaffold_1364_curated_13
unknown

Not on your lists

comp(9208..9489)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1364_curated_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9851..10828
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI0003613D0B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92885.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_300_bf_scaffold_1364_curated_15
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10887..11240
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI000364A18F
Uncharacterized protein {ECO:0000313|EMBL:CCH52596.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1364_curated_16
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11329..12036
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036D2109
Integral membrane protein TerC
Integral membrane protein TerC {ECO:0000313|EMBL:AFK01937.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_cont_300_bf_scaffold_1364_curated_17
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12240..12878
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K2P4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG98397.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_1364_curated_18
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13022..14362
DNA (1341bp) protein (447aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GKG5_9BACT
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Na+/H+ antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family
SCNpilot_cont_300_bf_scaffold_1364_curated_19
unknown

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comp(14487..14831)
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1364_curated_20
unknown

Not on your lists

comp(15192..15422)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1364_curated_21
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15509..15919)
DNA (411bp) protein (137aa)
Transcription elongation factor n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11P04_CYTH3
greA; transcription elongation factor; K06140 regulator of nucleoside diphosphate kinase
Tax=GWB2_Bacteroidetes_41_8_curated
SCNpilot_cont_300_bf_scaffold_1364_curated_22
unknown

Not on your lists

17123..17419
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI000379C21B
SCNpilot_cont_300_bf_scaffold_1364_curated_23
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17424..18032)
DNA (609bp) protein (203aa)
DeoR family transcriptional regulator n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002F16B29
Putative uncharacterized protein {ECO:0000313|EMBL:EIA10583.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1364_curated_24
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18061..19926)
DNA (1866bp) protein (622aa)
cytochrome-c oxidase (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
cytochrome C oxidase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F8FB0
Cytochrome C oxidase {ECO:0000313|EMBL:AKD57798.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_1364_curated_25
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20079..20978)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00037B5502
pobR3; transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCH02174.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_1364_curated_26
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20988..21680)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI000375F456
cAMP-binding protein
cAMP-binding protein {ECO:0000313|EMBL:AFD07864.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_300_bf_scaffold_1364_curated_27
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21677..22327)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003754DE9
HPP family protein {ECO:0000313|EMBL:CCH51915.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
HPP family protein
SCNpilot_cont_300_bf_scaffold_1364_curated_28
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22427..24076
DNA (1650bp) protein (550aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI000365DA4E
Chloride channel protein {ECO:0000313|EMBL:AIZ62646.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
chloride channel protein EriC
Displaying 28 items

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