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SCNpilot_cont_300_bf_scaffold_55_curated

Search features with annotation key words

Displaying items 1-30 of 344 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_55_curated_1
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3..2276)
DNA (2274bp) protein (758aa)
Nephrocystin-3 n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GT77_9BACT
Nephrocystin-3 {ECO:0000313|EMBL:CCH57106.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
NB-ARC domain-containing protein
SCNpilot_cont_300_bf_scaffold_55_curated_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2388..2948
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A5C69
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42096.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_55_curated_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3022..4410
DNA (1389bp) protein (463aa)
peptidase M28 n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D32A7
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:ADB42093.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_55_curated_4
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4552..5832
DNA (1281bp) protein (427aa)
isopenicillin N-epimerase n=1 Tax=Spirosoma panaciterrae RepID=UPI00035EB7E8
class V aminotransferase
Aminotransferase class V {ECO:0000313|EMBL:ADB42092.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_55_curated_5
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5866..7860
DNA (1995bp) protein (665aa)
peptidase S9 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003742680
Peptidase S9 {ECO:0000313|EMBL:AKD53731.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
peptidase S9 prolyl oligopeptidase active site domain-containing protein
SCNpilot_cont_300_bf_scaffold_55_curated_6
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8000..8452
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003668CBE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42090.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_55_curated_7
unknown

Not on your lists

8613..8879
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003704C05
SCNpilot_cont_300_bf_scaffold_55_curated_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9005..9487
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036449B2
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADB40137.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_55_curated_9
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9504..10325)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003640E10
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADB39115.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_55_curated_10
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10584..11639
DNA (1056bp) protein (352aa)
peptidase S9 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003634DA3
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ADB41000.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_55_curated_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11763..12140
DNA (378bp) protein (126aa)
Fis family transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A9DFF
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADB40999.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_55_curated_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12137..13183
DNA (1047bp) protein (349aa)
guanylate cyclase n=1 Tax=Spirosoma panaciterrae RepID=UPI000365A23F
adenylate/guanylate cyclase
Adenylate/guanylate cyclase {ECO:0000313|EMBL:ADB40998.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_55_curated_13
unknown

Not on your lists

13790..14758
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A61CC
SCNpilot_cont_300_bf_scaffold_55_curated_14
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14811..15386
DNA (576bp) protein (192aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
ribonuclease H (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4]
ribonuclease HII n=1 Tax=Spirosoma panaciterrae RepID=UPI000381254D
SCNpilot_cont_300_bf_scaffold_55_curated_15
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(15430..16623)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036EB0A7
ATPase; K07133
Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
SCNpilot_cont_300_bf_scaffold_55_curated_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16723..17277)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036443E7
Uncharacterized protein {ECO:0000313|EMBL:AKD58268.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_55_curated_17
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17316..18335
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000373329C
AraC family transcriptional regulator {ECO:0000313|EMBL:AKD58269.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
AraC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_55_curated_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18367..20535)
DNA (2169bp) protein (723aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003732C41
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADB42071.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_55_curated_19
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20673..21881)
DNA (1209bp) protein (403aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ADB42072.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ADB42072.1};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
acetyl-CoA acetyltransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI000375B819
SCNpilot_cont_300_bf_scaffold_55_curated_20
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22100..23056)
DNA (957bp) protein (319aa)
Hedgehog/intein hint domain protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000373AFD4
Hedgehog/intein hint domain-containing protein {ECO:0000313|EMBL:AKD53727.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
Hedgehog/intein hint domain-containing protein
SCNpilot_cont_300_bf_scaffold_55_curated_21
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23161..24735)
DNA (1575bp) protein (525aa)
L-amino-acid oxidase (EC:1.4.3.2); K00274 monoamine oxidase [EC:1.4.3.4]
L-amino-acid oxidase {ECO:0000313|EMBL:ADB42088.1}; EC=1.4.3.2 {ECO:0000313|EMBL:ADB42088.1};; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
amino acid oxidase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D4B6A
SCNpilot_cont_300_bf_scaffold_55_curated_22
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24832..26004)
DNA (1173bp) protein (391aa)
class I and II aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
aminotransferase class I/II n=1 Tax=Spirosoma panaciterrae RepID=UPI0003673BAD
Aminotransferase class I/II {ECO:0000313|EMBL:AKD53729.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_55_curated_23
unknown

Not on your lists

comp(26032..26178)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_55_curated_24
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26446..27378
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D82C0
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ADB36329.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_55_curated_25
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27560..28870
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B5DC4
Uncharacterized protein {ECO:0000313|EMBL:AKD55078.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_55_curated_26
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29042..30694
DNA (1653bp) protein (551aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000380D69B
Uncharacterized protein {ECO:0000313|EMBL:AKD58432.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_55_curated_27
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30972..33761
DNA (2790bp) protein (930aa)
TonB-denpendent receptor n=1 Tax=Spirosoma panaciterrae RepID=UPI00037B9633
TonB-dependent receptor {ECO:0000313|EMBL:AKD55165.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
TonB-dependent receptor plug
SCNpilot_cont_300_bf_scaffold_55_curated_28
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33825..35090
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000363837E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB38419.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_55_curated_29
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

35213..36250
DNA (1038bp) protein (346aa)
hypothetical protein; K01083 3-phytase [EC:3.1.3.8]
3-phytase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003623BB6
Uncharacterized protein {ECO:0000313|EMBL:ADB38420.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_55_curated_30
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(36419..36652)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003671409
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB36577.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
Displaying items 1-30 of 344 in total

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