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SCNpilot_cont_300_bf_scaffold_255_curated

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_255_curated_1
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1251..4043
DNA (2793bp) protein (931aa)
hypothetical protein, partial n=1 Tax=Spirosoma panaciterrae RepID=UPI0003713AA0
outer membrane adhesin-like protein
Outer membrane adhesin like proteiin {ECO:0000313|EMBL:AEI51420.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_300_bf_scaffold_255_curated_2
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4104..10373
DNA (6270bp) protein (2090aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035FF9DB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK04147.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_cont_300_bf_scaffold_255_curated_3
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10445..11269
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003795E4D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE49994.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_cont_300_bf_scaffold_255_curated_4
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11348..13390
DNA (2043bp) protein (681aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000370C301
hypothetical protein
Conserved repeat domain protein {ECO:0000313|EMBL:AEI49739.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_300_bf_scaffold_255_curated_5
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13396..14964
DNA (1569bp) protein (523aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003795811
Uncharacterized protein {ECO:0000313|EMBL:AHJ97026.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
PKD domain-containing protein
SCNpilot_cont_300_bf_scaffold_255_curated_6
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15194..15598
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036EB735
Uncharacterized protein {ECO:0000313|EMBL:AKD53804.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_255_curated_7
unknown

Not on your lists

comp(15788..16684)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B0BE6
SCNpilot_cont_300_bf_scaffold_255_curated_8
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17580..18131)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036E5F3A
WGS project CAIT00000000 data, contig 7 {ECO:0000313|EMBL:CCH54868.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
SCNpilot_cont_300_bf_scaffold_255_curated_9
unknown

Not on your lists

18324..18530
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_255_curated_10
unknown

Not on your lists

19020..19307
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F457D
SCNpilot_cont_300_bf_scaffold_255_curated_11
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19695..22049)
DNA (2355bp) protein (785aa)
Putative uncharacterized protein n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21P31_SACD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD79548.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024).;"
SCNpilot_cont_300_bf_scaffold_255_curated_12
Pseudomonas sp. GM16, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22040..23095)
DNA (1056bp) protein (352aa)
Flavin-dependent dehydrogenase n=2 Tax=Pseudomonas RepID=J3DN19_9PSED
Flavin-dependent dehydrogenase {ECO:0000313|EMBL:EJL95371.1}; TaxID=1144322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM16.;"
FAD dependent oxidoreductase
SCNpilot_cont_300_bf_scaffold_255_curated_13
unknown

Not on your lists

23482..23715
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_255_curated_14
unknown

Not on your lists

comp(23967..24077)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_255_curated_15
CG_Flavo_01, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24547..24675)
DNA (129bp) protein (43aa)
membrane protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035ED81A
hypothetical protein
Tax=CG_Flavo_01
SCNpilot_cont_300_bf_scaffold_255_curated_16
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24958..26655
DNA (1698bp) protein (566aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000377C0CC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41287.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_255_curated_17
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26685..27077)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A5AB2
DNA/RNA non-specific endonuclease
DNA/RNA non-specific endonuclease {ECO:0000313|EMBL:CCH02003.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_255_curated_18
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27423..28220)
DNA (798bp) protein (266aa)
enoyl-CoA hydratase/isomerase; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
enoyl-CoA hydratase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003778D1E
Enoyl-CoA hydratase {ECO:0000313|EMBL:AKD54593.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_255_curated_19
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28273..28860)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000372B807
Uncharacterized protein {ECO:0000313|EMBL:AKD54594.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_255_curated_20
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29017..30465)
DNA (1449bp) protein (483aa)
RNA polymerase sigma54 factor n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E5307
RNA polymerase sigma54 factor {ECO:0000313|EMBL:AKD54595.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor
SCNpilot_cont_300_bf_scaffold_255_curated_21
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30621..32099
DNA (1479bp) protein (493aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
nicotinate phosphoribosyltransferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11]
nicotinate phosphoribosyltransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A2701
SCNpilot_cont_300_bf_scaffold_255_curated_22
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32449..34200
DNA (1752bp) protein (584aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037C4C9C
Uncharacterized protein {ECO:0000313|EMBL:AKD54308.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_255_curated_23
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

34214..34951
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000364AE76
Two component transcriptional regulator, LytTR family protein {ECO:0000313|EMBL:AKD54309.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
LytTR family two component transcriptional regulator
SCNpilot_cont_300_bf_scaffold_255_curated_24
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

35105..35842
DNA (738bp) protein (246aa)
phosphatase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A1FD1
haloacid dehalogenase
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:ADB39410.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_255_curated_25
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

35864..37015
DNA (1152bp) protein (384aa)
oxidase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003703788
Oxidase {ECO:0000313|EMBL:AKD56687.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
FAD dependent oxidoreductase
SCNpilot_cont_300_bf_scaffold_255_curated_26
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

37181..40486
DNA (3306bp) protein (1102aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F111A
TonB-dependent receptor {ECO:0000313|EMBL:AKD56686.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
TonB-dependent receptor plug
SCNpilot_cont_300_bf_scaffold_255_curated_27
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

40544..42115
DNA (1572bp) protein (524aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035EF31A
Uncharacterized protein {ECO:0000313|EMBL:AKD56685.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_255_curated_28
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

42335..43255
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A7021
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ADB39406.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_255_curated_29
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

43259..43807
DNA (549bp) protein (183aa)
phosphohydrolase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036598CF
metal dependent phosphohydrolase
Phosphohydrolase {ECO:0000313|EMBL:AKD56684.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_255_curated_30
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

43810..46605
DNA (2796bp) protein (932aa)
phosphoesterase n=1 Tax=Spirosoma panaciterrae RepID=UPI000364DC36
Phosphoesterase {ECO:0000313|EMBL:ADB39404.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
phosphoesterase
Displaying items 1-30 of 90 in total

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