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SCNpilot_cont_300_bf_scaffold_551_curated

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_551_curated_1
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1..1632)
DNA (1632bp) protein (544aa)
NAD+ synthetase; K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
NAD+ synthetase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QV69_SPILD
NAD+ synthetase {ECO:0000313|EMBL:ADB42701.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_551_curated_2
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1653..2447)
DNA (795bp) protein (265aa)
Cation efflux protein n=5 Tax=Riemerella anatipestifer RepID=E4TDV3_RIEAD
cation efflux protein
Cobalt-zinc-cadmium resistance protein CzcD {ECO:0000313|EMBL:EMS33163.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
SCNpilot_cont_300_bf_scaffold_551_curated_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3119..4072)
DNA (954bp) protein (318aa)
Putative lipoprotein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QV75_SPILD
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ADB42707.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_551_curated_4
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4238..5458)
DNA (1221bp) protein (407aa)
Sodium/calcium exchanger membrane region n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QV77_SPILD
sodium/calcium exchanger membrane region; K07301 inner membrane protein
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:ADB42709.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_551_curated_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5566..6801)
DNA (1236bp) protein (412aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QV78_SPILD
efflux transporter, RND family, MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADB42710.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_551_curated_6
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6798..9008)
DNA (2211bp) protein (737aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QV79_SPILD
heavy metal efflux pump, CzcA family; K15726 cobalt-zinc-cadmium resistance protein CzcA
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ADB42711.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_551_curated_7
Parabacteroides sp. CAG:409, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9612..10292
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7JEY4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDE62390.1}; TaxID=1262913 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:409.;"
SCNpilot_cont_300_bf_scaffold_551_curated_8
unknown

Not on your lists

comp(12222..12398)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_551_curated_9
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12560..13027
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L7T3_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE54441.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_cont_300_bf_scaffold_551_curated_10
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13070..13396
DNA (327bp) protein (109aa)
Heavy metal transport/detoxification protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QV66_SPILD
Heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:ADB42698.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_551_curated_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13415..13660
DNA (246bp) protein (82aa)
Heavy metal transport/detoxification protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QV66_SPILD
Heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:ADB42698.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_551_curated_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14127..14330)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QVH3_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42805.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_551_curated_13
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14369..15397)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QVH2_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42804.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_551_curated_14
Erwinia billingiae, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15506..15796)
DNA (291bp) protein (97aa)
Transcriptional regulator, XRE family protein n=1 Tax=Erwinia billingiae (strain Eb661) RepID=D8MWV6_ERWBE
XRE family transcripitonal regulator
Transcriptional regulator, XRE family protein {ECO:0000313|EMBL:CAX61313.1}; TaxID=634500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia billingiae (strain Eb661).;"
SCNpilot_cont_300_bf_scaffold_551_curated_15
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15856..16587)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00037BD72A
Uncharacterized protein {ECO:0000313|EMBL:CCH57637.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
SCNpilot_cont_300_bf_scaffold_551_curated_16
unknown

Not on your lists

17606..17839
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_551_curated_17
unknown

Not on your lists

17868..17987
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_551_curated_18
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18094..18690
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K250_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG98203.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_551_curated_19
unknown

Not on your lists

18720..18851
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_551_curated_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19040..20158
DNA (1119bp) protein (373aa)
Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0G2_DYAFD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACT91896.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_300_bf_scaffold_551_curated_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20264..21415
DNA (1152bp) protein (384aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0G3_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91897.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_300_bf_scaffold_551_curated_22
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21669..22637
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037E4569
Uncharacterized protein {ECO:0000313|EMBL:KIA93088.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
alpha/beta hydrolase
SCNpilot_cont_300_bf_scaffold_551_curated_23
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22935..23510
DNA (576bp) protein (192aa)
RNA polymerase subunit sigma-24 n=1 Tax=Dyadobacter beijingensis RepID=UPI0003620A11
Sigma-24 {ECO:0000313|EMBL:GAF05641.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
ECF subfamily RNA polymerase sigma-24 subunit
SCNpilot_cont_300_bf_scaffold_551_curated_24
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23566..24588
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000376407D
anti-FecI sigma factor FecR
Tax=GWF2_Bacteroidetes_43_11_curated
SCNpilot_cont_300_bf_scaffold_551_curated_25
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24633..27245
DNA (2613bp) protein (871aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037A1269
Collagen-binding protein {ECO:0000313|EMBL:AKD05035.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
tonb-dependent receptor plug
SCNpilot_cont_300_bf_scaffold_551_curated_26
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27257..28114
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000380CA68
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
SCNpilot_cont_300_bf_scaffold_551_curated_27
unknown

Not on your lists

28976..29131
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_551_curated_28
unknown

Not on your lists

comp(29408..29557)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_551_curated_29
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30344..33898
DNA (3555bp) protein (1185aa)
TonB-dependent receptor plug n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GKG9_9BACT
TonB-dependent receptor plug {ECO:0000313|EMBL:CCH54394.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor plug
SCNpilot_cont_300_bf_scaffold_551_curated_30
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33918..35378
DNA (1461bp) protein (487aa)
carbohydrate-binding protein SusD n=1 Tax=Spirosoma luteum RepID=UPI0003640F87
RagB/SusD domain-containing protein
RagB/SusD domain protein {ECO:0000313|EMBL:ACT92033.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying items 1-30 of 80 in total

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