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SCNpilot_cont_300_bf_scaffold_124_curated

Search features with annotation key words

Displaying items 61-90 of 253 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_124_curated_61
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

66521..66952
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037885BA
Uncharacterized protein {ECO:0000313|EMBL:AKD56585.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_124_curated_62
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(66989..68068)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036BE5E5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB37004.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_124_curated_63
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(68093..68557)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A2C27
phage shock protein C
Phage shock protein C, PspC {ECO:0000313|EMBL:ADB37003.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_124_curated_64
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(68788..69408)
DNA (621bp) protein (207aa)
N-(5 -phosphoribosyl)anthranilate isomerase; K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24]
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
N-(5''''-phosphoribosyl)anthranilate isomerase n=1 Tax=Spirosoma panaciterrae RepID=UPI00035C54C9
SCNpilot_cont_300_bf_scaffold_124_curated_65
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(69558..71501)
DNA (1944bp) protein (648aa)
glycoside hydrolase n=1 Tax=Spirosoma luteum RepID=UPI000375504B
glycoside hydrolase
Glycoside hydrolase 97 {ECO:0000313|EMBL:ADB38488.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_124_curated_66
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(71505..75698)
DNA (4194bp) protein (1398aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:CCG99247.1}; EC=2.7.3.- {ECO:0000313|EMBL:CCG99247.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000368A42C
SCNpilot_cont_300_bf_scaffold_124_curated_67
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

75930..77813
DNA (1884bp) protein (628aa)
cytochrome-c peroxidase (EC:1.11.1.5); K00428 cytochrome c peroxidase [EC:1.11.1.5]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037AD4AF
Cytochrome C peroxidase {ECO:0000313|EMBL:AKD56566.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_124_curated_68
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(77854..79626)
DNA (1773bp) protein (591aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037073CC
Uncharacterized protein {ECO:0000313|EMBL:GAL86623.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
metallophosphoesterase
SCNpilot_cont_300_bf_scaffold_124_curated_69
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(79732..80529)
DNA (798bp) protein (266aa)
membrane protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000373033E
hypothetical protein; K09125 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB37046.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_124_curated_70
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(80596..82008)
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000372C4D4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB37047.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_124_curated_71
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

82144..82518
DNA (375bp) protein (125aa)
ribosome-binding factor A n=1 Tax=Spirosoma panaciterrae RepID=UPI000375F70D
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
ribosome-binding factor A; K02834 ribosome-binding factor A
SCNpilot_cont_300_bf_scaffold_124_curated_72
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

82676..83827
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000381D022
Releasing system transmembrane protein {ECO:0000313|EMBL:AKD56553.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_124_curated_73
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(83882..84955)
DNA (1074bp) protein (358aa)
GHMP kinase domain-containing protein; K00849 galactokinase [EC:2.7.1.6]
GHMP kinase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037BA6F5
GHMP kinase domain protein {ECO:0000313|EMBL:ADB37051.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_124_curated_74
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(84955..86175)
DNA (1221bp) protein (407aa)
major facilitator transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI000366902F
Major facilitator transporter {ECO:0000313|EMBL:AKD56552.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
glucose/galactose transporter
SCNpilot_cont_300_bf_scaffold_124_curated_75
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(86279..87640)
DNA (1362bp) protein (454aa)
glycosyl hydrolase family 109 n=1 Tax=Spirosoma panaciterrae RepID=UPI000367FD8E
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ADB37054.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_124_curated_76
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(87719..88804)
DNA (1086bp) protein (362aa)
beta-lactamase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A49CF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB37055.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_124_curated_77
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

89126..89587
DNA (462bp) protein (154aa)
6-pyruvoyl-tetrahydropterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
6-pyruvoyl tetrahydrobiopterin synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037650C5
Uncharacterized protein {ECO:0000313|EMBL:CCH52521.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
SCNpilot_cont_300_bf_scaffold_124_curated_78
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

89550..90308
DNA (759bp) protein (253aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16]
GTP cyclohydrolase I n=1 Tax=Spirosoma panaciterrae RepID=UPI0003778017
SCNpilot_cont_300_bf_scaffold_124_curated_79
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(90414..91346)
DNA (933bp) protein (311aa)
xylose isomerase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037AF48C
Xylose isomerase {ECO:0000313|EMBL:AKD56545.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
xylose isomerase
SCNpilot_cont_300_bf_scaffold_124_curated_80
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(91535..93754)
DNA (2220bp) protein (740aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D9A91
transcription termination factor Rho; K03628 transcription termination factor Rho
SCNpilot_cont_300_bf_scaffold_124_curated_81
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

94820..95614
DNA (795bp) protein (265aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
Baf family transcriptional regulator; K03525 type III pantothenate kinase [EC:2.7.1.33]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003634E9B
SCNpilot_cont_300_bf_scaffold_124_curated_82
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

95643..96872
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003687458
Uncharacterized protein {ECO:0000313|EMBL:AKD58585.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_124_curated_83
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

96873..97478
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00035D3AD1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB37349.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_124_curated_84
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(97511..97936)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036ABAF7
cytochrome C class I
Cytochrome c class I {ECO:0000313|EMBL:ADB37350.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_124_curated_85
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(97933..98631)
DNA (699bp) protein (233aa)
electron transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI00037FC933
electron transporter SCO1/SenC
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:ADB37351.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_124_curated_86
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(98570..99025)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003740520
Viral A-type inclusion protein {ECO:0000313|EMBL:AKD56289.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_124_curated_87
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(99133..100794)
DNA (1662bp) protein (554aa)
DNA repair protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036CBC50
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N)
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_124_curated_88
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(100837..101796)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000373D852
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB37354.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_124_curated_89
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(101793..103037)
DNA (1245bp) protein (415aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5]
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:ADB37355.1}; EC=6.3.2.5 {ECO:0000313|EMBL:ADB37355.1};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
phosphopantothenoylcysteine decarboxylase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B1789
SCNpilot_cont_300_bf_scaffold_124_curated_90
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(103155..103466)
DNA (312bp) protein (104aa)
RNA polymerase Rpb6 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003721B01
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB37356.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
Displaying items 61-90 of 253 in total

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