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SCNpilot_cont_300_bf_scaffold_124_curated_80

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(91535..93754)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 764.0
  • Bit_score: 1031
  • Evalue 0.0
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D9A91 similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 739.0
  • Bit_score: 1327
  • Evalue 0.0
transcription termination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 764.0
  • Bit_score: 1031
  • Evalue 0.0

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2220
ATGTTCAAGAAAGAAGAATTAGACAAGAAGTCCCGCGAGGAACTTCACCCCATTGCCGAGCAATTCGGTATCCGTAATATTTCCAAATACACCAAAGAAAAACTGGTTTACGAAATCATAAAACAACAGTCGGAACAACCCAGTCCAGCCGAAACTGAGGCTGTGGCCGTACCGACTGAAGCACCTAAGCGTGGTAGTCGACGTCCTAAATCAGCCGTATCGACTACTGAAGCCTCGGTCTCTACAGAGGTAACTCCTATTCCAGAAATTCAGCCTGTAGAAACTGCAACGGTTAGCGATGCAGCTCCACAGCCCCGTCAACGCGCTCGGCGTGACCGGGTTGACACAACAAAGGCGAGCACTCCCTCGGCTGAAACAACCGAAGCCGAGCAACCCGCTCCAATCGTAGAGAACACCACAACGACCACAACAGCCGAGCCTGAAACGACATCGACTGAGCCAACATCAGAGCCCTCGCAACCGTTCCGCCAGCAACGCGACACGCGCGATACTAACCCACGAAATGGTCAGTATAATCAGCAGGGGCGCAACCGGACAGAAGGTCGACGCGAAGGCGAAGAAGGAGGGAATGGTACAGAGCGGTCGTTCCGGCAGGCTCCACCCCGAAACGACCGAGACCGGAATGGTCGCCAGGACCAGAATCAGCCCCGAAATGGCCGCCAAGACTGGCAACGTGATAATCGGCAGCGATTCGAACCGAACCGGGAACGTAATGAAAGCGGATCGGGTACCAGTAATCCTCGCGACAATAATCAACGTCGTGAACCTCGCCCACGCACACCGCGCGTCGCCACGGATGAACTGACTCTGAACTACGGAGGCCAGGCCGACGACGACTTCCTGACACCAACTGTTGTTTCGGACGATACAGCACCGAATATGCAATCGACAGCCGAATCGATTGTCTCAGTTACTCCTCCAACGAGTGACCCCACCGATGCACCAACCGATATACAACCAGACCAGTCGCTACCTGTCGATGCAGGCCAAATCGCTCAGCCTCAACTGAACCAGCCAAGCCGCGAAGCCCAGGAATATCAGAATCGTATCCGACGTCAGTATAACCAGCATATTCGGGAGTTCGACGGAATCATCGACAATGAAGGTGTTCTGGAAATCATGTCCGATGGTGGCTATGGCTTCCTGCGTTCGGCCGACTACAACTACCTGGCTAGCCCCGACGATATCTATGTATCTCCTTCTCAAATCAAGTTGTTTGGCCTGAAAACCGGCGATACTGTTCGAGGTGCTATCCGCCCACCGAAAGAAGGCGAAAAATACTTTGCGCTTCTGCGCGTATCAACCGTAAATGGTAAAACGACAGAAGAAATCCGCGATCGTATTCCGTTCGAATACCTGACACCCCTGTTCCCGGAAGAACACATTCGGTTGAGTACTCGGCCCGAGAACTATTCATCCCGGGTACTGGACTTGTTTGCACCAATTGGGAAAGGTCAGCGCGGAATGATCGTTGCTCAGCCTAAAACGGGTAAGACCGTATTGCTGAAGGAGATCGCCAATGCTATTACGAAAAACCACCCCGAAATTTATCTGATCGTATTGCTGATCGATGAACGCCCGGAAGAGGTAACCGATATGGCTCGGAGTGTGAATGCCGAAGTGATTTCGTCAACCTTCGATGAACAGGCCGACCGCCATGTGAAAGTATCAAGTATGGTGCTGGAAAAAGCAAAGCGGATGGTCGAATGTGGTCATGATGTAGTGATTCTGCTTGACTCCATTACGCGTCTGGCCCGGGCCTATAACACGGTAGTGCCATCGTCGGGTAAAATTCTGTCGGGGGGTGTCGACGCCAATGCCCTGCATCGTCCGAAGCGCTTCTTCGGCGCAGCCCGGAACGTAGAGAATGGCGGTTCGCTCACCATTATTGCCACAGCCCTGATCGATACCGGCTCGAAAATGGATGAGGTTATCTTTGAAGAATTTAAAGGAACGGGTAACATGGAACTCCAGCTCGATCGGAAGCTGGCCAACAAGCGGGTTTACCCAGCCGTTGACGTACTGGCTTCGGGCACCCGCCGGGAAGACTTGTTGCTTGACAAAGAAACCCTACAACGCGTCTGGATTTTACGCAAGCACATGGCCGACATGAACCCGATGGAAACCATGGACTTCCTGCTCGACCGGATGAGAGGAACCCGCACCAACGAAGAGTTCCTCATTTCCATGAATCGATAG
PROTEIN sequence
Length: 740
MFKKEELDKKSREELHPIAEQFGIRNISKYTKEKLVYEIIKQQSEQPSPAETEAVAVPTEAPKRGSRRPKSAVSTTEASVSTEVTPIPEIQPVETATVSDAAPQPRQRARRDRVDTTKASTPSAETTEAEQPAPIVENTTTTTTAEPETTSTEPTSEPSQPFRQQRDTRDTNPRNGQYNQQGRNRTEGRREGEEGGNGTERSFRQAPPRNDRDRNGRQDQNQPRNGRQDWQRDNRQRFEPNRERNESGSGTSNPRDNNQRREPRPRTPRVATDELTLNYGGQADDDFLTPTVVSDDTAPNMQSTAESIVSVTPPTSDPTDAPTDIQPDQSLPVDAGQIAQPQLNQPSREAQEYQNRIRRQYNQHIREFDGIIDNEGVLEIMSDGGYGFLRSADYNYLASPDDIYVSPSQIKLFGLKTGDTVRGAIRPPKEGEKYFALLRVSTVNGKTTEEIRDRIPFEYLTPLFPEEHIRLSTRPENYSSRVLDLFAPIGKGQRGMIVAQPKTGKTVLLKEIANAITKNHPEIYLIVLLIDERPEEVTDMARSVNAEVISSTFDEQADRHVKVSSMVLEKAKRMVECGHDVVILLDSITRLARAYNTVVPSSGKILSGGVDANALHRPKRFFGAARNVENGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQLDRKLANKRVYPAVDVLASGTRREDLLLDKETLQRVWILRKHMADMNPMETMDFLLDRMRGTRTNEEFLISMNR*