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SCNpilot_cont_300_bf_scaffold_64_curated

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Displaying items 1-30 of 208 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_64_curated_1
unknown

Not on your lists

2..94
DNA (93bp) protein (31aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000381A2E0
SCNpilot_cont_300_bf_scaffold_64_curated_2
unknown

Not on your lists

165..776
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000377AC36
SCNpilot_cont_300_bf_scaffold_64_curated_3
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(867..2039)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036BA4C3
Sensor protein lytS {ECO:0000313|EMBL:CCH52104.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Sensor protein lytS
SCNpilot_cont_300_bf_scaffold_64_curated_4
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2311..3342
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003704AA5
Sensor protein lytS {ECO:0000313|EMBL:CCH52104.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
signal transduction histidine kinase LytS
SCNpilot_cont_300_bf_scaffold_64_curated_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3523..4719
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003745307
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ADB37838.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_64_curated_6
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4716..5498
DNA (783bp) protein (261aa)
LytTR family transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI0003618DDB
LytTR family transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ADB37839.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_64_curated_7
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5592..6701)
DNA (1110bp) protein (370aa)
lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182]
lipid-A-disaccharide synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003804906
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:AKD56730.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_64_curated_8
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6784..7200)
DNA (417bp) protein (139aa)
6-pyruvoyl-tetrahydropterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
6-pyruvoyl tetrahydrobiopterin synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003689A9F
Uncharacterized protein {ECO:0000313|EMBL:CCH55179.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
SCNpilot_cont_300_bf_scaffold_64_curated_9
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7475..8440
DNA (966bp) protein (322aa)
ADP-L-glycero-D-manno-heptose-6-epimerase; K03274 ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|SAAS:SAAS00055236};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E72F6
SCNpilot_cont_300_bf_scaffold_64_curated_10
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8448..8819)
DNA (372bp) protein (124aa)
membrane protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000376A176
hypothetical protein; K09922 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39460.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_64_curated_11
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8835..10154)
DNA (1320bp) protein (440aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000365FA4B
histidine kinase
SCNpilot_cont_300_bf_scaffold_64_curated_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10151..10822)
DNA (672bp) protein (224aa)
PhoB family transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI0003797355
transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADB39462.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_64_curated_13
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10925..11728)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000382E4BC
Uncharacterized protein {ECO:0000313|EMBL:AKD56734.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_64_curated_14
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11829..13376)
DNA (1548bp) protein (516aa)
peptidase S8 n=1 Tax=Spirosoma panaciterrae RepID=UPI00038098B1
Peptidase S8 {ECO:0000313|EMBL:AKD56735.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
peptidase S8/S53 subtilisin kexin sedolisin
SCNpilot_cont_300_bf_scaffold_64_curated_15
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13518..14819
DNA (1302bp) protein (434aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
X-Pro aminopeptidase n=1 Tax=Spirosoma panaciterrae RepID=UPI00035C516D
Peptidase M24 {ECO:0000313|EMBL:ADB39465.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_64_curated_16
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14903..15544)
DNA (642bp) protein (214aa)
TetR family transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI00037CE396
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADB39466.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_64_curated_17
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15847..16287)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037258C4
Uncharacterized protein {ECO:0000313|EMBL:AKD56772.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_64_curated_18
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16559..17773
DNA (1215bp) protein (405aa)
saccharopine dehydrogenase; K00290 saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]
saccharopine dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037FBA42
Saccharopine dehydrogenase {ECO:0000313|EMBL:CCH55171.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
SCNpilot_cont_300_bf_scaffold_64_curated_19
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17862..18644
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003616AD3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39527.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_64_curated_20
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18704..19534
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F7F45
Energy transducer TonB {ECO:0000313|EMBL:AKD56775.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
TonB family protein
SCNpilot_cont_300_bf_scaffold_64_curated_21
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19552..19974
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E3D83
TonB family protein
TonB family protein {ECO:0000313|EMBL:ADB39529.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_64_curated_22
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20005..21156
DNA (1152bp) protein (384aa)
carboxynorspermidine decarboxylase; K13747 carboxynorspermidine decarboxylase [EC:4.1.1.-]
carboxynorspermidine decarboxylase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003686EB0
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:ADB39531.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_64_curated_23
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21224..21790)
DNA (567bp) protein (189aa)
glycerol acyltransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A5B56
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:CCH55181.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
phospholipid/glycerol acyltransferase
SCNpilot_cont_300_bf_scaffold_64_curated_24
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21883..21984)
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GMQ4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH55182.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
SCNpilot_cont_300_bf_scaffold_64_curated_25
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22111..23259)
DNA (1149bp) protein (383aa)
histidinol-phosphatase (EC:3.1.3.15); K01089 imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
imidazoleglycerol-phosphate dehydratase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003774155
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|SAAS:SAAS00082593}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_64_curated_26
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23600..24607
DNA (1008bp) protein (336aa)
cold-shock protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036CC674
Cold-shock protein {ECO:0000313|EMBL:AKD56726.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_64_curated_27
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24611..25939
DNA (1329bp) protein (443aa)
para-aminobenzoate synthase subunit I (EC:4.1.3.27); K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D8DF2
Aminobenzoate synthetase {ECO:0000313|EMBL:AKD56725.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_64_curated_28
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26179..29031
DNA (2853bp) protein (951aa)
TonB-dependent receptor n=1 Tax=Spirosoma panaciterrae RepID=UPI00036CB69F
Uncharacterized protein {ECO:0000313|EMBL:ADB39451.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_64_curated_29
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29063..29809
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036FA098
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39450.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_64_curated_30
unknown

Not on your lists

29778..29882
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying items 1-30 of 208 in total

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