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SCNpilot_cont_300_bf_scaffold_775_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_775_curated_1
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2..415
DNA (414bp) protein (138aa)
Nephrocystin-3 n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GT77_9BACT
Nephrocystin-3 {ECO:0000313|EMBL:CCH57106.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_775_curated_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(470..2503)
DNA (2034bp) protein (678aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037D7E8E
blue (type 1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ADB42097.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_775_curated_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2538..2879)
DNA (342bp) protein (114aa)
tRNA-binding protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035CCCAC
export-related chaperone CsaA; K06878 tRNA-binding protein
Export-related chaperone CsaA {ECO:0000313|EMBL:ADB42098.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_775_curated_4
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2984..4690)
DNA (1707bp) protein (569aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000363571E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42099.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_775_curated_5
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4851..7115
DNA (2265bp) protein (755aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003692627
tetratricopeptide repeat protein,histidine kinase
Tetratricopeptide repeat protein,histidine kinase {ECO:0000313|EMBL:AFL82207.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
SCNpilot_cont_300_bf_scaffold_775_curated_6
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(7134..7886)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003714527
hypothetical protein
Tax=GWF2_Bacteroidetes_40_14_curated
SCNpilot_cont_300_bf_scaffold_775_curated_7
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8188..9552
DNA (1365bp) protein (455aa)
sorbosone dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037DA5C9
Sorbosone dehydrogenase {ECO:0000313|EMBL:AKD53739.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
L-sorbosone dehydrogenase
SCNpilot_cont_300_bf_scaffold_775_curated_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9671..10870
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035C50B4
Peptidase {ECO:0000313|EMBL:AHF15311.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
glpG; Rhomboid protease gluP
SCNpilot_cont_300_bf_scaffold_775_curated_9
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10893..11240)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000367BE94
ModE family transcriptional regulator; K02019 molybdate transport system regulatory protein
Putative transcriptional regulator, ModE family {ECO:0000313|EMBL:ADB42103.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_775_curated_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11497..11976
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D6431
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63132.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_300_bf_scaffold_775_curated_11
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11980..12210
DNA (231bp) protein (77aa)
Putative transcriptional regulator n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KLB9_SOLCM
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AFD08621.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_300_bf_scaffold_775_curated_12
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12229..14274)
DNA (2046bp) protein (682aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000360C0E1
Uncharacterized protein {ECO:0000313|EMBL:AKD53743.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_775_curated_13
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14446..15825
DNA (1380bp) protein (460aa)
cytochrome bd ubiquinol oxidase subunit I; K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003675CE5
Cytochrome D ubiquinol oxidase subunit I {ECO:0000313|EMBL:AKD53744.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_775_curated_14
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15902..16936
DNA (1035bp) protein (345aa)
cytochrome d ubiquinol oxidase, subunit II; K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000376405B
Cytochrome D oxidase subunit I {ECO:0000313|EMBL:AKD53745.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_775_curated_15
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16938..17627)
DNA (690bp) protein (230aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
deoxyribonuclease V (EC:3.1.21.7); K05982 deoxyribonuclease V [EC:3.1.21.7]
endonuclease V n=1 Tax=Spirosoma panaciterrae RepID=UPI0003790F6E
SCNpilot_cont_300_bf_scaffold_775_curated_16
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17752..19275)
DNA (1524bp) protein (508aa)
Peptidase S41 n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GT65_9BACT
Peptidase S41 {ECO:0000313|EMBL:CCH57094.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
peptidase S41
SCNpilot_cont_300_bf_scaffold_775_curated_17
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19328..20485)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A1013
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCH57090.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
AraC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_775_curated_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20491..21111)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035ECA26
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42111.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_775_curated_19
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21282..22517
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A9871
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42112.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_775_curated_20
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22620..24242
DNA (1623bp) protein (541aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037786D5
Uncharacterized protein {ECO:0000313|EMBL:AKD58272.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
Displaying 20 items

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