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SCNpilot_cont_300_bf_scaffold_196_curated

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Displaying items 1-30 of 123 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_196_curated_1
unknown

Not on your lists

comp(1..1092)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000381A2E0
SCNpilot_cont_300_bf_scaffold_196_curated_2
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1538..3757
DNA (2220bp) protein (740aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037B0E7A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH03463.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_196_curated_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4224..7223
DNA (3000bp) protein (1000aa)
helicase SNF2 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003721E54
SNF2-related protein {ECO:0000313|EMBL:ADB42139.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SNF2-like protein
SCNpilot_cont_300_bf_scaffold_196_curated_4
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7319..7495
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037F4722
Uncharacterized protein {ECO:0000313|EMBL:CCH51540.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_196_curated_5
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7577..8089)
DNA (513bp) protein (171aa)
phosphoribosyltransferase; K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
phosphoribosyltransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D1D68
Phosphoribosyltransferase {ECO:0000313|EMBL:AKD53754.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_300_bf_scaffold_196_curated_6
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8224..8649
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000370E132
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42142.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_196_curated_7
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8746..9333
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035C7050
Uncharacterized protein {ECO:0000313|EMBL:AKD53756.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_196_curated_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9448..11646
DNA (2199bp) protein (733aa)
peptidase S9B dipeptidylpeptidase IV domain-containing protein; K01278 dipeptidyl-peptidase 4 [EC:3.4.14.5]
peptidase S9 n=1 Tax=Spirosoma panaciterrae RepID=UPI000377D45C
Peptidase S9B dipeptidylpeptidase IV domain protein {ECO:0000313|EMBL:ADB42144.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_196_curated_9
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11741..12670
DNA (930bp) protein (310aa)
nitrilase (EC:3.5.5.1)
Nitrilase {ECO:0000313|EMBL:CCG99009.1}; EC=3.5.5.1 {ECO:0000313|EMBL:CCG99009.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
nitrilase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003813494
SCNpilot_cont_300_bf_scaffold_196_curated_10
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12677..13798)
DNA (1122bp) protein (374aa)
small mechanosensitive ion channel protein MscS n=1 Tax=Spirosoma panaciterrae RepID=UPI000372800B
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ADB41896.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_196_curated_11
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13854..14279)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000367F5F0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ19040.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
SCNpilot_cont_300_bf_scaffold_196_curated_12
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14254..14514)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A6E83
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI49853.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_300_bf_scaffold_196_curated_13
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14945..18523
DNA (3579bp) protein (1193aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037D5476
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ADB41969.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_196_curated_14
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18709..19800
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000372B079
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39337.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_196_curated_15
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20058..20753
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003759122
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB36631.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_196_curated_16
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20772..24011)
DNA (3240bp) protein (1080aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000376E720
Uncharacterized protein {ECO:0000313|EMBL:AKD58364.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_196_curated_17
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24059..25573)
DNA (1515bp) protein (505aa)
sulfatase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037FDA3E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41895.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_196_curated_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25638..29102)
DNA (3465bp) protein (1155aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036826CE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41894.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_196_curated_19
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29244..30752)
DNA (1509bp) protein (503aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000382BAAC
ribonuclease inhibitor
Leucine-rich repeat, ribonuclease inhibitor subtype {ECO:0000313|EMBL:ADB41893.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_196_curated_20
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30766..31836)
DNA (1071bp) protein (357aa)
peptidylglycine monooxygenase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036213CF
NHL repeat containing protein
NHL repeat containing protein {ECO:0000313|EMBL:ADB41892.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_196_curated_21
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31965..32402)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003823535
Uncharacterized protein {ECO:0000313|EMBL:AKD57377.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_196_curated_22
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32581..33072)
DNA (492bp) protein (164aa)
diguanylate cyclase n=1 Tax=Spirosoma panaciterrae RepID=UPI000378B7E8
GAF domain-containing protein {ECO:0000313|EMBL:CCH56758.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
GAF domain-containing protein; K07170 GAF domain-containing protein
SCNpilot_cont_300_bf_scaffold_196_curated_23
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33113..33619)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036A7B4D
Uncharacterized protein {ECO:0000313|EMBL:AKD57379.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_196_curated_24
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33693..34529)
DNA (837bp) protein (279aa)
rod shape-determining protein MreC n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D830B
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC
Rod shape-determining protein MreC {ECO:0000313|EMBL:ADB41888.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_196_curated_25
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34614..35639)
DNA (1026bp) protein (342aa)
cell shape-determining protein MreB n=1 Tax=Spirosoma panaciterrae RepID=UPI000377CC14
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:ADB41887.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_196_curated_26
unknown

Not on your lists

comp(35816..36217)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003719FF7
SCNpilot_cont_300_bf_scaffold_196_curated_27
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

36419..37921
DNA (1503bp) protein (501aa)
gh3 auxin-responsive promoter n=1 Tax=Spirosoma panaciterrae RepID=UPI000375F999
Uncharacterized protein {ECO:0000313|EMBL:AKD57382.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
GH3 auxin-responsive promoter
SCNpilot_cont_300_bf_scaffold_196_curated_28
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

37935..39275
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003719910
Uncharacterized protein {ECO:0000313|EMBL:AKD57383.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_196_curated_29
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

39281..39871
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00036398ED
Uncharacterized protein {ECO:0000313|EMBL:AKD57384.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_196_curated_30
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

39868..41040
DNA (1173bp) protein (391aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spiros
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Spirosoma panaciterrae RepID=UPI00035CAB13
Displaying items 1-30 of 123 in total

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