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SCNpilot_cont_300_bf_scaffold_1303_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1303_curated_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(63..389)
DNA (327bp) protein (109aa)
Transcriptional regulator, ArsR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW26_DYAFD
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACT93158.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_300_bf_scaffold_1303_curated_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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861..1820
DNA (960bp) protein (320aa)
Integrase family protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QVG8_SPILD
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADB42800.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_1303_curated_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1864..2352
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003734C4F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42803.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_1303_curated_4
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2483..3019
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QRB3_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39667.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_1303_curated_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3110..3442
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QRB2_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39666.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_1303_curated_6
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3598..4575
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00037B7E6F
Uncharacterized protein {ECO:0000313|EMBL:KFF11058.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
nucleic acid-binding protein
SCNpilot_cont_300_bf_scaffold_1303_curated_7
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4699..6429
DNA (1731bp) protein (577aa)
hypothetical protein n=2 Tax=unclassified candidate division KSB1 RepID=UPI0003737C0D
Uncharacterized protein {ECO:0000313|EMBL:KFF17288.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1303_curated_8
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6792..7253)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Lysinibacillus fusiformis ZB2 RepID=K9AMH1_9BACI
hypothetical protein
Tax=BJP_08E140C01_Flavobacteriales_35_8
SCNpilot_cont_300_bf_scaffold_1303_curated_9
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7253..9007)
DNA (1755bp) protein (585aa)
ThiF family protein n=2 Tax=Bacteroidales RepID=D4WN88_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EKN30928.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
UBA/THIF-type NAD/FAD binding protein
SCNpilot_cont_300_bf_scaffold_1303_curated_10
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9015..10010)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9H780_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EOR99932.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1303_curated_11
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10012..11037)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002ED8188
Patatin-like phospholipase {ECO:0000313|EMBL:CEN46664.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
Patatin
SCNpilot_cont_300_bf_scaffold_1303_curated_12
Psychroflexus gondwanensis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11222..11902)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Psychroflexus gondwanensis ACAM 44 RepID=N1WRR2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EMY79917.1}; TaxID=1189619 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus gondwanensis ACAM 44.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1303_curated_13
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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12541..13362
DNA (822bp) protein (274aa)
Glycoside hydrolase family 35 id=4837587 bin=GWA2_Bacteroidetes_A19_40_15 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
mannonate dehydratase
Tax=GWA2_Bacteroidetes_40_15_curated
SCNpilot_cont_300_bf_scaffold_1303_curated_14
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13830..14222)
DNA (393bp) protein (131aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K03502 DNA polymerase V
DNA-directed DNA polymerase {ECO:0000313|EMBL:ADB42797.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ADB42797.1};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
DNA-directed DNA polymerase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QVG5_SPILD
Displaying 14 items

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