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SCNpilot_cont_300_bf_scaffold_85_curated

Search features with annotation key words

Displaying items 1-30 of 236 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_85_curated_1
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(3..1952)
DNA (1950bp) protein (650aa)
Gll4248 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NDI7_GLOVI
hypothetical protein
Tax=BJP_IG2158_Anaerolineales_38_74
SCNpilot_cont_300_bf_scaffold_85_curated_2
unknown

Not on your lists

comp(3679..3825)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_85_curated_3
unknown

Not on your lists

comp(3844..4074)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036406A6
SCNpilot_cont_300_bf_scaffold_85_curated_4
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5352..5870
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI000372B16D
WGS project CAIT00000000 data, contig 6 {ECO:0000313|EMBL:CCH53100.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_300_bf_scaffold_85_curated_5
unknown

Not on your lists

6036..6293
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_85_curated_6
unknown

Not on your lists

7039..7368
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_85_curated_7
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8095..9915
DNA (1821bp) protein (607aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036BCFBD
Uncharacterized protein {ECO:0000313|EMBL:AKD56085.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_85_curated_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10760..11482
DNA (723bp) protein (241aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QCE5_SPILD
LytTR family transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ADB36256.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_85_curated_9
unknown

Not on your lists

11899..12555
DNA (657bp) protein (219aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_85_curated_10
unknown

Not on your lists

12892..13005
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_85_curated_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13194..13565
DNA (372bp) protein (124aa)
Integrase catalytic region n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QVU9_SPILD
Integrase catalytic region; K07497 putative transposase
Integrase catalytic region {ECO:0000313|EMBL:ADB42931.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_85_curated_12
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13891..16113)
DNA (2223bp) protein (741aa)
TonB-denpendent receptor n=1 Tax=Spirosoma panaciterrae RepID=UPI000376FDF0
TonB-dependent receptor {ECO:0000313|EMBL:AKD58716.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_300_bf_scaffold_85_curated_13
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16510..17049)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037A1E67
Uncharacterized protein {ECO:0000313|EMBL:CCH53137.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_85_curated_14
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17352..19919
DNA (2568bp) protein (856aa)
TonB-denpendent receptor n=1 Tax=Spirosoma panaciterrae RepID=UPI000377DAD9
TonB-dependent receptor {ECO:0000313|EMBL:CCH53176.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_85_curated_15
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19983..20696
DNA (714bp) protein (238aa)
signal peptide protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000372D1C5
Putative signal peptide protein {ECO:0000313|EMBL:CCH53175.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_85_curated_16
unknown

Not on your lists

comp(21421..21624)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_85_curated_17
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21640..22668
DNA (1029bp) protein (343aa)
LacI family transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI00036E6E8D
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADB36416.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_300_bf_scaffold_85_curated_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22729..23784
DNA (1056bp) protein (352aa)
xylan 1,4-beta-xylosidase (EC:3.2.1.37)
Xylan 1,4-beta-xylosidase {ECO:0000313|EMBL:ADB36417.1}; EC=3.2.1.37 {ECO:0000313|EMBL:ADB36417.1};; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
alpha-N-arabinofuranosidase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036C3CB4
SCNpilot_cont_300_bf_scaffold_85_curated_19
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23915..27427)
DNA (3513bp) protein (1171aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003798B2D
Cartilage acidic protein 1 68 kDa chondrocyte-expressed protein
Cartilage acidic protein 1 68 kDa chondrocyte-expressed protein {ECO:0000313|EMBL:CCG98160.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_85_curated_20
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27462..29000)
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D0242
RagB/SusD domain protein
RagB/SusD domain protein {ECO:0000313|EMBL:CCG98161.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_85_curated_21
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29034..32168)
DNA (3135bp) protein (1045aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003612265
TonB-dependent receptor plug {ECO:0000313|EMBL:CCG98162.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
TonB-dependent receptor plug
SCNpilot_cont_300_bf_scaffold_85_curated_22
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32747..34636)
DNA (1890bp) protein (630aa)
Malate synthase {ECO:0000313|EMBL:EON77427.1}; EC=2.3.3.9 {ECO:0000313|EMBL:EON77427.1};; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
Malate synthase (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000371B1D7
SCNpilot_cont_300_bf_scaffold_85_curated_23
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34763..35380)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037D1CC3
Lactate utilization protein B/C {ECO:0000313|EMBL:EHQ28770.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein; K00782 hypothetical protein
SCNpilot_cont_300_bf_scaffold_85_curated_24
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35396..36781)
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003757912
4Fe-4S ferredoxin {ECO:0000313|EMBL:ETZ23630.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_85_curated_25
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36781..37524)
DNA (744bp) protein (248aa)
Fe-S oxidoreductase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036CA0ED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU05144.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_300_bf_scaffold_85_curated_26
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(37674..38939)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E7320
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CCH54141.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
major facilitator superfamily protein
SCNpilot_cont_300_bf_scaffold_85_curated_27
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(39084..40529)
DNA (1446bp) protein (482aa)
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AKD05024.1}; EC=1.2.1.16 {ECO:0000313|EMBL:AKD05024.1};; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
gabD; NADP(+)-dependent succinate-semialdehyde dehydrogenase (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003771352
SCNpilot_cont_300_bf_scaffold_85_curated_28
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(40562..41689)
DNA (1128bp) protein (376aa)
alcohol dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037158F1
Alcohol dehydrogenase {ECO:0000313|EMBL:BAH39942.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
SCNpilot_cont_300_bf_scaffold_85_curated_29
Sulfurihydrogenibium sp. YO3AOP1, Sulfurihydrogenibium, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(41844..42800)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000368BD4C
2-hydroxyacid dehydrogenase
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:ACD65885.1}; TaxID=436114 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Sulfurihydrogenibium.;" source="Sulfurihydrogenibium sp. (strain YO3AOP1).;"
SCNpilot_cont_300_bf_scaffold_85_curated_30
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42870..43499)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003803602
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ30161.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Displaying items 1-30 of 236 in total

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