ggKbase home page

SCNpilot_cont_300_bf_scaffold_102_curated_12

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 13043..16588

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003743C7B similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 999.99
  • Bit_score: 1704
  • Evalue 0.0
polymorphic membrane protein similarity KEGG
DB: KEGG
  • Identity: 31.5
  • Coverage: 888.0
  • Bit_score: 311
  • Evalue 9.60e-82
Polymorphic membrane protein {ECO:0000313|EMBL:ADB36683.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.5
  • Coverage: 888.0
  • Bit_score: 311
  • Evalue 4.30e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3546
ATGAAAACATACGCTCTACCAACCGCAACCCGCTGGTTCTTCAGTTGGTTATTGTTTCTTCAAACGGGCTTGTCGATCAGTAGCCTGGCTCAGACCGTTACGCAATCCTACACCACCACTGGATATTATTCTTATACCGTACCAGCGGGAGGCCCCTTCAGTGTAACCCTGACAACCAGAGGAGGTGATGGCGGTAATTCCCCATCATATCAAGGAGGTAGTGGTGCTAAAATGGTATCGACCACTACGGTACAGGGAGGAGATCAACTCATTTGTATTGTTGGGCAGGCAGGTCAGTCCAGCGATGAACCCCAGCCAAGCAATACGGGTGGCGGGGGTGGTGGCACGGCTATCATTCTGAAGCGAGGGAATGATTTAACCTTACTTATGGCAAGTAGCGGAGGTGGTGGCGCATCACAACGATGGGGCAGTGGTGGCGGTGGACAGGGCTTAGGCTCCGGCGATGGCGGAGCGGGTTCCGGAAACGCCACTTCGGGCGGAGGTGGTGGTGGCGGAGGCTACTTGAGCGCCGGTGGTGACGGCAGGACGTCTTTACCAGTGCGAGGTGGAACCGGAGGTAAACAGGCTTCATTAACCAACATCAGTTCAGGAGGGAATAACAACGCTGGTAATTGCTATGGCGGAAGCGGTTTTGGCGGAGGAGGTGGTGGTACAACGTTGAGTTATGGTGGCGGGGGTGGCGGAGGATATGGAGGGGGTGATGGCGGGGGAGGTGGTAGTGGTGTAAGTCAGGGAGGCAATTCGTATGGCACCGGCACCATTACCCTGGGAGTAGATGGGGGTGGTGCGAAAGCCGATGGATTTGCTACCATCCAGTTTGCTGCCAACTCCATCAAAGCTATCCTCACTTCTACCACGATCACCAATTGCTCGGGTCAGACCGTTTCGATCCCAGGCTCCATCACCGCCACCGGAACCTGGACCCTGCAACTCTCCGGCGGAGCGACCGTTTCGGGTACTGATAGCGGCACGTTTGCCGTGGCTGTATCGCCTACAACCTCTACTACCTACACTATTGCATCGGCCACCTATACCAATAGCATTACCCAATCAACTACCCTTACTGGCAGCGCTATCGTCAAGATCGTAACCCCGGCTACTCGGCTCTATGTGAAGGCCAACGCGAGCGGGGTCCAAACCGGCCTTTCCTGGAACGACGCCTTTACCAGCCTCCAGGATGCCCTTAATTACGGCTGCCCAACTGCCCTTACCGAAATATGGGTTGCCAGCGGAACCTATAAACCCGGCACTACCCGTTCCGCCAGTTTCGCTATGCTACCCAATGTCAGCATCTACGGGGGATTTACGGGTACAGAGTCTGATCTTAGTCAGCGGCCCCGAATTGACCCCATCAACGGATCACCCTCCAGTTCGACACTCTCCGGTGATGTTGGACCCTCGCTAGCGGCCTACCATGTCATTTATAATCCAAGCAGCCTCAACCTCACCAGCTCGGCAAGGCTCGACGGTTTTGTTATCTCTGGAGGCAATGCCAATGGGCTGCTCGACAACCAGCTCAATGGCGGAGGCATCTACAACGATGGCAGCGGCAGCGGACATGTCTGTAACCCCACCATTGCCAACTGCCTGTTTGCAAATAATCAGACCTCCGCTTACGGCGGAGCTATTTACAATGGCGGCAGAAACAGCGGCCTGTCGAGTCCTACCCTCATCAACTGCGCTTTCACGGGCAACTACGCCCGCATCGATGGCGGGGCCATCTACAATGACGGTTTCCTGGGGGTATCCAGCCCTTCCATAACCAACTGCCTGTTCGTCGGCAATCAGACCAACACTACCGGGGCCGCCATCACCAACATGGCCCGGCAGGGTACCGCCAGCCCTACGCTGGTCAACTGCGGATTCCTCAATAACTCCGCCGGGGGAGGAAACGGAGGTGCCATCAACAACTTCGCTCCCGGCGGAAACTGTCTGCCCACGTTTACCAACTGCTCCTTTCAGGGAAATATCGCCAACTATGGCTCCCTGATGATCAGCGCTGGGCTGGATGGTATCTGCCAATCTACCTTAATCAACTGTGTCCTCTTCAACCAGGGCAGTAATGCTTTCTACAATAACCTCTCCTCAGTGCGACTGCTTTCCTGCCTGATCGAGTCCACCACCATCGACTATACTACCGACCCCAGTAATCTCACCGCCACTACCAACCCCTTCAGCTCTACGGCGAGCCTGACCCTCAACGCCTGTACACCTGCTATCAATGCCGGGCTCAGCTCGACCTCAGCCCTCAATGGCATCAGCACTGATCTGGCCAATAACCCTCGCCTTGTAGGAGCGTCTGTCGATATGGGAGCCTACGAGTTTCAGGGTGATCCCAGCTTTCCTATTGCCTTTACCCAACAACCGCCCTCAGCCTCAGCACTCTGTGGCGGCACAGCGCTGAACATTCCCACCAGCCTTACCGGAACCGGACCCATCACGTATCAGTGGTTCAAAAGTGGAACCTCCCTTAGCGCCCAAACGACCAATACCCTCTCCTTATCCAGTCTACAAACCTCCGATGCAGGTAGCTACTCGCTGGTCGCCATCGGCACCTGTAACTCCCTTACTAGTAGTACTTTCAGTCTAACGGTCAATAGCGTTAATGCCGCTATTCTGAATCCGGGGCCAGGGAGCACGACACTCTCCTGCGGAAGCCCCACCGTCAGCCTGACGGCCAACGGTGGCACTACTTACGAATGGGAGGATACCTCCACACAGCCCGTGCGCGTACTCTCACAGGCAGGCACCTACTCGGTTGTCGTTTCGTCGGCGCTGGGATGCTCGGCTACGGCTTCCGTTACCTTATTCTTCCGAAATACCTTAAATTCGAGCGCTTCGGCCTACTCCCCTATGGCTCCGGTGAACGCAGTGGTTAATATGCTGGCCACAGGTGGTAATGCCTATCAGTGGACATCGCCCTCTTCAGCCTCCTTCACCACATCCAGCACCAGTGCCAACATTTCGGCCCGACTACTGTCAGCGGGGCCACAGACATTTACGGTCGTGATCACTCTGGGGACCTGTCAGCAAACCCGAACCGTGAGCGTCACGGCCACCAATGGTCCCGACCTCTCCCCTATCATTGAGCTACCCGATGCCAACTTTAGTCCTGGTTCGAGTGCCAAACAATCACTAGTCCGTATTTTTGAAGTTGGCTGGCTTCCAACTTCGCCCAGCAGTATTACCATTACCCTGACCGCTCCAGCGGGCTATTCGCTGGCGTTCGATGCTAGTCAGACCTCGACCAATGTATCCGGGGGAAACACCAATCCGGTAACCATCAATAATAGTGATTGGGAGGTAATCGGCAATCTCAACGACCAGCAGCTAACGTTACGGGCTCGGTCGGGGGTGTATATCCGGGGAGGTAGTCAATCGGTGTTGGGCTTCACGTTAGTGCGTACGACAGCCAACTCGGGAAGCGTCTCCAATCTGACCATCAATGTAGCCAACGATAGTAGTGGGCAGTACGATCGATTCAGTACTAACAACGTCTACGCCCGAATCCTGAATGGGCTCTAG
PROTEIN sequence
Length: 1182
MKTYALPTATRWFFSWLLFLQTGLSISSLAQTVTQSYTTTGYYSYTVPAGGPFSVTLTTRGGDGGNSPSYQGGSGAKMVSTTTVQGGDQLICIVGQAGQSSDEPQPSNTGGGGGGTAIILKRGNDLTLLMASSGGGGASQRWGSGGGGQGLGSGDGGAGSGNATSGGGGGGGGYLSAGGDGRTSLPVRGGTGGKQASLTNISSGGNNNAGNCYGGSGFGGGGGGTTLSYGGGGGGGYGGGDGGGGGSGVSQGGNSYGTGTITLGVDGGGAKADGFATIQFAANSIKAILTSTTITNCSGQTVSIPGSITATGTWTLQLSGGATVSGTDSGTFAVAVSPTTSTTYTIASATYTNSITQSTTLTGSAIVKIVTPATRLYVKANASGVQTGLSWNDAFTSLQDALNYGCPTALTEIWVASGTYKPGTTRSASFAMLPNVSIYGGFTGTESDLSQRPRIDPINGSPSSSTLSGDVGPSLAAYHVIYNPSSLNLTSSARLDGFVISGGNANGLLDNQLNGGGIYNDGSGSGHVCNPTIANCLFANNQTSAYGGAIYNGGRNSGLSSPTLINCAFTGNYARIDGGAIYNDGFLGVSSPSITNCLFVGNQTNTTGAAITNMARQGTASPTLVNCGFLNNSAGGGNGGAINNFAPGGNCLPTFTNCSFQGNIANYGSLMISAGLDGICQSTLINCVLFNQGSNAFYNNLSSVRLLSCLIESTTIDYTTDPSNLTATTNPFSSTASLTLNACTPAINAGLSSTSALNGISTDLANNPRLVGASVDMGAYEFQGDPSFPIAFTQQPPSASALCGGTALNIPTSLTGTGPITYQWFKSGTSLSAQTTNTLSLSSLQTSDAGSYSLVAIGTCNSLTSSTFSLTVNSVNAAILNPGPGSTTLSCGSPTVSLTANGGTTYEWEDTSTQPVRVLSQAGTYSVVVSSALGCSATASVTLFFRNTLNSSASAYSPMAPVNAVVNMLATGGNAYQWTSPSSASFTTSSTSANISARLLSAGPQTFTVVITLGTCQQTRTVSVTATNGPDLSPIIELPDANFSPGSSAKQSLVRIFEVGWLPTSPSSITITLTAPAGYSLAFDASQTSTNVSGGNTNPVTINNSDWEVIGNLNDQQLTLRARSGVYIRGGSQSVLGFTLVRTTANSGSVSNLTINVANDSSGQYDRFSTNNVYARILNGL*